More than 300 homologs were found in PanDaTox collection
for query gene Xaut_4726 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  55.87 
 
 
652 aa  698    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  57.66 
 
 
682 aa  714    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  60.98 
 
 
666 aa  793    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  59.94 
 
 
681 aa  784    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  55.59 
 
 
682 aa  696    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  56.93 
 
 
682 aa  711    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  61.09 
 
 
667 aa  792    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  73.2 
 
 
673 aa  962    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  74.67 
 
 
671 aa  991    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  59.44 
 
 
666 aa  778    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  61.42 
 
 
666 aa  795    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  60.23 
 
 
667 aa  786    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  74.26 
 
 
684 aa  944    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  56.74 
 
 
667 aa  719    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  74.26 
 
 
667 aa  945    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  55.13 
 
 
675 aa  696    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  70.81 
 
 
671 aa  942    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  68.63 
 
 
668 aa  871    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  65 
 
 
673 aa  866    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  61.57 
 
 
695 aa  794    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  61.21 
 
 
660 aa  763    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  59.76 
 
 
670 aa  780    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  56.22 
 
 
682 aa  706    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  55.62 
 
 
691 aa  716    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  55.98 
 
 
682 aa  702    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  73.71 
 
 
671 aa  957    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  59.85 
 
 
662 aa  756    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  57.73 
 
 
678 aa  731    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  59.57 
 
 
685 aa  788    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  74.07 
 
 
671 aa  978    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  58.73 
 
 
673 aa  738    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  60.26 
 
 
669 aa  794    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  59.22 
 
 
680 aa  776    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  54.93 
 
 
684 aa  691    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  59.26 
 
 
667 aa  759    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  74.22 
 
 
671 aa  979    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  55.49 
 
 
682 aa  701    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  59.68 
 
 
669 aa  790    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  73.93 
 
 
671 aa  994    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  66.37 
 
 
671 aa  890    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  57.81 
 
 
682 aa  714    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  72.89 
 
 
691 aa  946    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  58.37 
 
 
662 aa  744    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  73.04 
 
 
671 aa  947    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  60.65 
 
 
667 aa  785    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  73.52 
 
 
667 aa  934    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  57.44 
 
 
678 aa  730    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  59.85 
 
 
676 aa  791    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  58.03 
 
 
668 aa  731    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 
675 aa  1375    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  70.27 
 
 
668 aa  921    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  64 
 
 
670 aa  836    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  67.16 
 
 
669 aa  888    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  55.79 
 
 
669 aa  700    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  73.52 
 
 
667 aa  949    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  54.59 
 
 
696 aa  683    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  47.65 
 
 
655 aa  601  1e-170  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  46.47 
 
 
656 aa  597  1e-169  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  45.49 
 
 
691 aa  568  1e-160  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.29 
 
 
666 aa  518  1.0000000000000001e-145  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  56.73 
 
 
450 aa  509  1e-143  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  43.27 
 
 
681 aa  506  9.999999999999999e-143  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.28 
 
 
668 aa  507  9.999999999999999e-143  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  42.96 
 
 
653 aa  505  1e-141  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  44.19 
 
 
665 aa  502  1e-141  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  41.43 
 
 
661 aa  497  1e-139  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  41.43 
 
 
661 aa  497  1e-139  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.73 
 
 
674 aa  498  1e-139  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  55.43 
 
 
480 aa  494  9.999999999999999e-139  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_011772  BCG9842_B2811  acetyl-CoA carboxylase biotin carboxylase subunit  54.12 
 
 
445 aa  492  9.999999999999999e-139  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000387379 
 
 
-
 
NC_005945  BAS2370  acetyl-CoA carboxylase biotin carboxylase subunit  53.9 
 
 
445 aa  489  1e-137  Bacillus anthracis str. Sterne  Bacteria  normal  0.17472  n/a   
 
 
-
 
NC_011725  BCB4264_A2512  acetyl-CoA carboxylase biotin carboxylase subunit  54.12 
 
 
445 aa  491  1e-137  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2548  acetyl-CoA carboxylase biotin carboxylase subunit  53.9 
 
 
445 aa  489  1e-137  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  47.24 
 
 
667 aa  489  1e-137  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2815  carbamoyl-phosphate synthase L chain, ATP-binding  43.64 
 
 
654 aa  491  1e-137  Rhodoferax ferrireducens T118  Bacteria  normal  0.102576  n/a   
 
 
-
 
NC_011658  BCAH187_A2604  acetyl-CoA carboxylase biotin carboxylase subunit  54.12 
 
 
445 aa  491  1e-137  Bacillus cereus AH187  Bacteria  normal  0.189257  n/a   
 
 
-
 
NC_009485  BBta_4048  putative acyl-CoA carboxylase biotin-carrying subunit  44.21 
 
 
670 aa  489  1e-137  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.139435  normal  0.287749 
 
 
-
 
NC_011138  MADE_02415  methylcrotonyl-CoA carboxylase, alpha subunit  42.9 
 
 
666 aa  491  1e-137  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  45.89 
 
 
675 aa  489  1e-137  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2549  acetyl-CoA carboxylase biotin carboxylase subunit  53.9 
 
 
445 aa  488  1e-136  Bacillus cereus ATCC 10987  Bacteria  normal  0.569347  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  55.11 
 
 
450 aa  487  1e-136  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  43.33 
 
 
652 aa  488  1e-136  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_005957  BT9727_2328  acetyl-CoA carboxylase biotin carboxylase subunit  53.9 
 
 
445 aa  488  1e-136  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.611182  n/a   
 
 
-
 
NC_006274  BCZK2286  acetyl-CoA carboxylase biotin carboxylase subunit  53.9 
 
 
445 aa  489  1e-136  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2561  acetyl-CoA carboxylase biotin carboxylase subunit  53.67 
 
 
445 aa  486  1e-136  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.5537800000000004e-18 
 
 
-
 
NC_008541  Arth_1386  carbamoyl-phosphate synthase L chain, ATP-binding  42.5 
 
 
752 aa  486  1e-136  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  43.24 
 
 
662 aa  483  1e-135  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  45.48 
 
 
660 aa  482  1e-135  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  54.24 
 
 
498 aa  483  1e-135  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007958  RPD_0350  carbamoyl-phosphate synthase L chain, ATP-binding  44.86 
 
 
679 aa  483  1e-135  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.000448558 
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  45.92 
 
 
679 aa  484  1e-135  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_013730  Slin_3536  Carbamoyl-phosphate synthase L chain ATP- binding protein  52.55 
 
 
517 aa  481  1e-134  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1463  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.35 
 
 
674 aa  481  1e-134  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3759  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.83 
 
 
672 aa  479  1e-134  Acidovorax sp. JS42  Bacteria  normal  normal  0.746239 
 
 
-
 
NC_011992  Dtpsy_3040  Carbamoyl-phosphate synthase L chain ATP-binding  45.97 
 
 
672 aa  482  1e-134  Acidovorax ebreus TPSY  Bacteria  normal  0.233889  n/a   
 
 
-
 
NC_007958  RPD_2535  carbamoyl-phosphate synthase L chain, ATP-binding  44.86 
 
 
671 aa  481  1e-134  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  45.32 
 
 
674 aa  479  1e-134  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  41.53 
 
 
689 aa  481  1e-134  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2928  carbamoyl-phosphate synthase L chain, ATP-binding  42.75 
 
 
675 aa  480  1e-134  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.321789  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2356  acetyl-CoA carboxylase biotin carboxylase subunit  53.23 
 
 
445 aa  482  1e-134  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.488234  n/a   
 
 
-
 
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