Gene Slin_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3536 
Symbol 
ID8727289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4269325 
End bp4270878 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content54% 
IMG OID 
ProductCarbamoyl-phosphate synthase L chain ATP- binding protein 
Protein accessionYP_003388342 
Protein GI284038412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGCC AGCTACAGCC CGGTTATTTA TTCTTAACAT TACCAAGTAG TACCGTGCCA 
ACTATTCAGA AAATTCTTGT CGCCAATCGG GGCGAAATCG CATTGCGGAT TATGCGCACC
GCCCGCGAAA TGGGCATAAA GACCGTAGCC ATTTACTCCG AGGCCGACCG AAATGCCCTT
CATGTTCGCT ATGCCGACGA AGCGGTATAT GTGGGGCCTG CCCCTTCCTC CGAATCATAT
TTAAAAACAG ATGTCATTAT TGATGTCTGT AAGCGACTGA ACGTCGACGC TATTCATCCG
GGGTACGGTT TTCTATCCGA AAATGCTGGC TTCGCCCGTT CCGTACGGGA GGCCGGGTTG
ATTTTCATTG GACCCTCGCC CGAGAGCATT GAGGTGATGG GGAGCAAACT GGCGGCCAAA
GCAGCCGTCG CCAATTATAA CATCCCGATG GTTCCGGGCA CGCCATCGGC CATCACCGAC
CGGGCCGAGG CCAAAGTCAT TTCAGCAAAA ATAGGCTACC CGATTCTGAT TAAAGCCAGT
GCGGGCGGGG GTGGCAAAGG GATGCGTGTC GTGGAAAATG AAGCCGATTT CGATGAGCAG
ATGGACCGTG CCGTCAGCGA AGCCATTTCG GCCTTTGGCG ACGGGTCGGT GTTTATCGAG
AAATATGTCA CCTCACCCCG GCACGTTGAA ATTCAGGTGC TGGGCGATCA GCACGGCAAC
ATCATCCACT TGTTCGAGCG TGAATGTTCG GTGCAGCGCA GGCACCAGAA AGTCGTTGAA
GAAGCCCCTT CGGCTATTCT GACGCCCGAA ATCCGGGATG CGATGGGCCG GGCGGCTGTC
GATGTAGCCC GTGCCTGCGG GTACTACGGT GCCGGAACGG TAGAATTCAT CGTGAATGAT
ACGCTCGATT TTTATTTTCT GGAGATGAAC ACTCGTCTTC AGGTGGAGCA CCCCGTAACG
GAGCAGATTA CGGGCGTCGA TCTGGTGAAG CAGATGATTT ACATCGCCGA AGGGAAGCCG
CTCACCATCC GGCAGGAAGA TTTACAGATC AAAGGCCATG CCGTTGAAGT GCGGGTTTAT
GCCGAAGACC CCGCCAACAA CTTCCTGCCC GACGTAGGTA CGCTCGACAC GTACATCCGG
CCCCAGGGCA ATGGCGTTCG GGTCGACGAT GGTTTCGAGC AGGGCATGGC GATTCCTATT
TATTATGACC CCATGATTGC CAAACTGATC ACCTACGGCG ACACACGGGA CGAAGCCATT
CAGAAAATGA TTCGGGCCAT TGATGAATAC CAGATTTCGG GCGTACAAAC GACCCTGCCT
TTCTGCCGCT TTGTGATGGA GCACGACGCG TTCCGATCGG GTCAGTTCGA CACGGGTTTT
GTCAGTAAGT ACTTCACCCC CGACAAACTA ACCCCCGCCC CCGATGCCAC CGAGCAGCAA
CTAGCCGCCG TTCTGGCTGC ATGGCTGATG GAGACGAATA AACCCAAAAG CACTGGCGCT
GCCGTGACAA CAACATCGGC AAAAAGCAAG TGGAAAGCGA ATAGACTGGC ATAA
 
Protein sequence
MLRQLQPGYL FLTLPSSTVP TIQKILVANR GEIALRIMRT AREMGIKTVA IYSEADRNAL 
HVRYADEAVY VGPAPSSESY LKTDVIIDVC KRLNVDAIHP GYGFLSENAG FARSVREAGL
IFIGPSPESI EVMGSKLAAK AAVANYNIPM VPGTPSAITD RAEAKVISAK IGYPILIKAS
AGGGGKGMRV VENEADFDEQ MDRAVSEAIS AFGDGSVFIE KYVTSPRHVE IQVLGDQHGN
IIHLFERECS VQRRHQKVVE EAPSAILTPE IRDAMGRAAV DVARACGYYG AGTVEFIVND
TLDFYFLEMN TRLQVEHPVT EQITGVDLVK QMIYIAEGKP LTIRQEDLQI KGHAVEVRVY
AEDPANNFLP DVGTLDTYIR PQGNGVRVDD GFEQGMAIPI YYDPMIAKLI TYGDTRDEAI
QKMIRAIDEY QISGVQTTLP FCRFVMEHDA FRSGQFDTGF VSKYFTPDKL TPAPDATEQQ
LAAVLAAWLM ETNKPKSTGA AVTTTSAKSK WKANRLA