| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0319 |
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| Symbol | |
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| ID | 4172913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 370438 |
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| End bp | 372507 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638053318 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_659905 |
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| Protein GI | 109896650 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTG AGCAAATGAT AAACATTCAA AATAGCGATA CACAAGCTGG TGCAACCCAA
TCCCATGGGC TTAAAAAGCA AAATCAGTTT CACAAAATAC TGATCGCCAA TCGCGGCGAA
ATTGCCTTGA GGGTTATTCG CACGGCTCGC CAAATGGGGT ATCGCACCGT GGCTGTGTAT
AGCGAGGCAG ACAAAGACGC TGCTCATGTA CTCGCCGCCG ATCAAGCGGT GTGTGTTGGC
CCTGCCAGTG TGTCCGAGTC GTATCTGATG ATCGACAACA TTATTGCGGC AGCGCACAAA
ACCCAAGCCG ATGCTATTCA CCCTGGTTAT GGTTTTTTAT CTGAAAACCC AGCGTTTGCA
CGGGCCTGTG ATGCCGCGGG GATTCAGTTT ATCGGCCCTG ATGCCTCGGC CATTGAATTG
ATGGGCAGCA AGCGGCTATC AAAGGTAGCC ATGTTAGACG CCGGCGTGCC GTGTATTCCT
GGCTATCAAG GTGCAGAACA AAGCGACCAA GTGCTGGTTA AAAAGGCAGC AGATGTGGGC
TTTCCTATCA TGGTTAAAGC CTCTGCTGGT GGTGGCGGGC GCGGTATGCG TTTGGTCACT
GAGCAAGGTG AGTTAGCGGC GCAGATAAAA ACCGCACGCT CTGAAGCACT TAGCGCGTTC
GGTAGCGGTG AATTAATTCT TGAACGCGCG GTTTTGGCCC CTCGGCATAT CGAAATTCAA
ATATTTGCTG ATAGTCACGG CAATACCGTT TATTTAGGTG AACGTGACTG TTCGATACAG
CGTCGTCATC AAAAAGTGGT TGAAGAAGCG CCATCGCCCT TTGTTGATGA AGAATTACGG
GAACGCATGG GGCAAGCGGC TGTGAGTGCA GCCAAAGCGT GCGGCTATCA AGGCGCAGGC
ACGGTAGAGT TCTTGGTTGA TAGTGACAAA AACTTCTACT TTTTAGAAAT GAATACTCGC
TTACAAGTGG AGCATCCGGT GACTGAACTT ATCACAGGAC TGGACTTAGT GGAGTGGCAA
CTGCGGGTAG CTGCGGGTGA AGCGCTGCCG CTAACGCAAC AAGAGGTTAA CTTCAACGGA
CACGCCATAG AAGTGCGGTT ATACGCGGAA GACCCTCGGC AACGCTTTAT GCCCCAAACG
GGCAATATTC TTGTATGGCA ATACCCTGAA CGCGAAGGCA TTCGTGTCGA TCACGGCATC
AATACCGGTG ATACCGTCAG TGCTCATTAC GATCCCATGT TGGCGAAAGT CATCGCCTAT
GGGCCAGACC GGGCAACCGC CGCACGGCGA CTCGCCAGTG GCATTGAAGA CATTCAGCTA
GTGGGCGTGA ACACCAACAA AGCTTTCTTG CTTAATGTAC TGCGCCACCC CGCATTTATA
AACGCCGAGA CGACAACAGC CTTTATTGAG CAACATTTTA CCGAGCATGC CAGTACCCAA
AATACGGCTC CCGCGATAGG CACGCTAGCC AGAGCCGCCA TGATTTACTT TCAGCACCCT
TTATTTGGTC AGCACGCTTC ATTTGACCAG CCTACTTGGA GCAGTGCAGC ACCTCAGGTG
TATCACTTCA CCCTGAAAAT CAATGAGCAC ATCTATGCAG TGCAAATACA CAAACAGGCG
GACCGATACT TAGTTAAAAG TGAGACCCAA GAGACCGAAC TTACCTTAGT AAGTCATGGG
GCGAATCAAG CGGTGGTGAT TGAAGAGGAC ATTCGCCAAG GTTTTAGCTA TGCGCAGCAA
GACACAACAC TCTTTTTAGA TGATGGCAGC GGCCATTACC GAATCGACGA TATCACCCAG
CAGCCAGCAA ATGTGAGTGA GCAAAACGCA AGTGGCGAAA TCAACGCTGT CATGGACGGA
GTGATAATCG ACGTATTAGT AAAAGAGGGA GATGCCGTTG AAACCGGGCA ACTTATGGTC
GTCATGGAAG CCATGAAAAT GGAGCATCAG TTAAAGGCGC TGAGCACGGG GCGCGTCACT
GAGGTGCGCG CAACAACGGG CCAGCAGGTG AAATCTAAAC AGCTATTGGT CAGTATCAGT
AGCAACGACG ATACGCACAG CGATGCGTAA
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| Protein sequence | MSTEQMINIQ NSDTQAGATQ SHGLKKQNQF HKILIANRGE IALRVIRTAR QMGYRTVAVY
SEADKDAAHV LAADQAVCVG PASVSESYLM IDNIIAAAHK TQADAIHPGY GFLSENPAFA
RACDAAGIQF IGPDASAIEL MGSKRLSKVA MLDAGVPCIP GYQGAEQSDQ VLVKKAADVG
FPIMVKASAG GGGRGMRLVT EQGELAAQIK TARSEALSAF GSGELILERA VLAPRHIEIQ
IFADSHGNTV YLGERDCSIQ RRHQKVVEEA PSPFVDEELR ERMGQAAVSA AKACGYQGAG
TVEFLVDSDK NFYFLEMNTR LQVEHPVTEL ITGLDLVEWQ LRVAAGEALP LTQQEVNFNG
HAIEVRLYAE DPRQRFMPQT GNILVWQYPE REGIRVDHGI NTGDTVSAHY DPMLAKVIAY
GPDRATAARR LASGIEDIQL VGVNTNKAFL LNVLRHPAFI NAETTTAFIE QHFTEHASTQ
NTAPAIGTLA RAAMIYFQHP LFGQHASFDQ PTWSSAAPQV YHFTLKINEH IYAVQIHKQA
DRYLVKSETQ ETELTLVSHG ANQAVVIEED IRQGFSYAQQ DTTLFLDDGS GHYRIDDITQ
QPANVSEQNA SGEINAVMDG VIIDVLVKEG DAVETGQLMV VMEAMKMEHQ LKALSTGRVT
EVRATTGQQV KSKQLLVSIS SNDDTHSDA
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