More than 300 homologs were found in PanDaTox collection
for query gene Daro_4003 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  56.85 
 
 
668 aa  699    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  68.62 
 
 
682 aa  892    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  56.4 
 
 
667 aa  711    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  57.33 
 
 
673 aa  717    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  54.91 
 
 
667 aa  687    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  53.69 
 
 
668 aa  647    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  79.46 
 
 
662 aa  1062    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  56.27 
 
 
667 aa  682    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  100 
 
 
667 aa  1380    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  56.82 
 
 
671 aa  705    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  59.1 
 
 
660 aa  726    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  67.01 
 
 
678 aa  863    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  56.8 
 
 
667 aa  695    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  53.88 
 
 
671 aa  678    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  57.74 
 
 
695 aa  721    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  53.42 
 
 
669 aa  664    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  57.89 
 
 
666 aa  725    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  55.64 
 
 
652 aa  677    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  56.53 
 
 
667 aa  719    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  56.27 
 
 
684 aa  683    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  57.12 
 
 
666 aa  709    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  68.23 
 
 
682 aa  889    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  52.74 
 
 
669 aa  660    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  60.96 
 
 
662 aa  808    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  67.94 
 
 
682 aa  884    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  56.44 
 
 
671 aa  703    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  68.15 
 
 
675 aa  894    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  57.39 
 
 
673 aa  716    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  56.59 
 
 
671 aa  714    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  56.1 
 
 
667 aa  704    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  54.6 
 
 
680 aa  697    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  66.81 
 
 
684 aa  879    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  68.73 
 
 
691 aa  911    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  55.9 
 
 
667 aa  680    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  55.41 
 
 
671 aa  691    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  68.62 
 
 
682 aa  890    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  56.85 
 
 
681 aa  739    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  56.74 
 
 
675 aa  719    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  56.89 
 
 
691 aa  691    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  55.7 
 
 
671 aa  683    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  68.37 
 
 
682 aa  890    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  69.35 
 
 
682 aa  904    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  56.98 
 
 
676 aa  743    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  56.7 
 
 
668 aa  709    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  57.74 
 
 
666 aa  723    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  57.25 
 
 
685 aa  751    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  57.82 
 
 
669 aa  726    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  56.89 
 
 
673 aa  711    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  67.79 
 
 
682 aa  896    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  55.74 
 
 
670 aa  702    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  54.76 
 
 
670 aa  702    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  57.04 
 
 
671 aa  700    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  66.27 
 
 
678 aa  860    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  65.3 
 
 
696 aa  855    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  58.94 
 
 
671 aa  761    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  52.06 
 
 
669 aa  669    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  46.64 
 
 
655 aa  558  1e-157  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  46.34 
 
 
656 aa  553  1e-156  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  43.09 
 
 
691 aa  530  1e-149  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.02 
 
 
666 aa  512  1e-144  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2694  carbamoyl-phosphate synthase L chain, ATP-binding  44.08 
 
 
661 aa  513  1e-144  Pseudomonas mendocina ymp  Bacteria  normal  0.250479  normal  0.322946 
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  44.74 
 
 
681 aa  511  1e-143  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  47.55 
 
 
667 aa  507  9.999999999999999e-143  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  56.38 
 
 
498 aa  508  9.999999999999999e-143  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  43.66 
 
 
653 aa  502  1e-141  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  44.31 
 
 
643 aa  505  1e-141  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  56.31 
 
 
493 aa  501  1e-140  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  46.26 
 
 
673 aa  496  1e-139  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4157  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.2 
 
 
663 aa  498  1e-139  Polaromonas sp. JS666  Bacteria  normal  0.825758  normal 
 
 
-
 
NC_004310  BR0018  biotin carboxylase  46.11 
 
 
673 aa  492  9.999999999999999e-139  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  45.29 
 
 
662 aa  492  9.999999999999999e-139  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  44.13 
 
 
661 aa  495  9.999999999999999e-139  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_009719  Plav_2788  carbamoyl-phosphate synthase L chain ATP-binding  44.46 
 
 
673 aa  489  1e-137  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.683073  normal  0.298513 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  55.56 
 
 
450 aa  489  1e-137  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  43.83 
 
 
661 aa  489  1e-137  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  42.07 
 
 
665 aa  489  1e-137  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  53.91 
 
 
448 aa  486  1e-136  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_007969  Pcryo_0342  carbamoyl-phosphate synthase L chain, ATP-binding  44.38 
 
 
704 aa  487  1e-136  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000380  methylcrotonyl-CoA carboxylase biotin-containing subunit  42.75 
 
 
686 aa  485  1e-135  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1598  acetyl-CoA carboxylase, biotin carboxylase  54.71 
 
 
446 aa  485  1e-135  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000269909  n/a   
 
 
-
 
NC_009720  Xaut_1855  carbamoyl-phosphate synthase L chain ATP-binding  44.16 
 
 
666 aa  484  1e-135  Xanthobacter autotrophicus Py2  Bacteria  normal  0.181486  normal 
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  44.82 
 
 
660 aa  484  1e-135  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal 
 
 
-
 
NC_013132  Cpin_1521  acetyl-CoA carboxylase, biotin carboxylase  56.42 
 
 
494 aa  482  1e-135  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0244  acetyl-CoA carboxylase biotin carboxylase subunit  56.98 
 
 
451 aa  483  1e-135  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_1473  Carbamoyl-phosphate synthase L chain ATP- binding protein  44.1 
 
 
666 aa  483  1e-135  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0475  carbamoyl-phosphate synthase L chain, ATP-binding  45.22 
 
 
670 aa  483  1e-135  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0984  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  54.26 
 
 
446 aa  484  1e-135  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000016105  normal  0.0128167 
 
 
-
 
NC_009512  Pput_1774  carbamoyl-phosphate synthase L chain, ATP-binding  44.36 
 
 
650 aa  483  1e-135  Pseudomonas putida F1  Bacteria  hitchhiker  0.00809985  hitchhiker  0.00202818 
 
 
-
 
NC_007954  Sden_2248  carbamoyl-phosphate synthase L chain, ATP-binding  42.8 
 
 
697 aa  483  1e-135  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0039  carbamoyl-phosphate synthase L chain ATP-binding  45.66 
 
 
655 aa  483  1e-135  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.540073  n/a   
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  53.36 
 
 
446 aa  481  1e-134  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  52.93 
 
 
499 aa  482  1e-134  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2736  biotin carboxylase/biotin-containing subunit  42.96 
 
 
649 aa  481  1e-134  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0311  3-methylcrotonoyl-CoA carboxylase, alpha subunit  43.48 
 
 
706 aa  481  1e-134  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4351  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.26 
 
 
677 aa  480  1e-134  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1803  acetyl-CoA carboxylase biotin carboxylase subunit  53.47 
 
 
445 aa  480  1e-134  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.220445  n/a   
 
 
-
 
NC_010501  PputW619_1809  carbamoyl-phosphate synthase L chain ATP-binding  44.36 
 
 
650 aa  481  1e-134  Pseudomonas putida W619  Bacteria  normal  normal  0.202229 
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  53.59 
 
 
446 aa  480  1e-134  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_013501  Rmar_0675  acetyl-CoA carboxylase, biotin carboxylase  57.43 
 
 
452 aa  479  1e-134  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3665  carbamoyl-phosphate synthase L chain ATP-binding  44.21 
 
 
650 aa  481  1e-134  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.000243321  hitchhiker  0.000000000183935 
 
 
-
 
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