| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1853 |
|---|
| Symbol | |
|---|
| ID | 7382214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1973483 |
|---|
| End bp | 1975531 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643655170 |
|---|
| Product | Carbamoyl-phosphate synthase L chain ATP-binding |
|---|
| Protein accession | YP_002553310 |
|---|
| Protein GI | 222111046 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCA AAATTCTGAT TGCCAACCGA GGCGAAATCG CCTGCCGCGT GATAGCCACG
GCCAAGAAGA TGGGCATTGC CACCGTGGCC GTCTACTCCG ACGCCGACAA GGACGCGCGC
CATGTCAAGC TGGCCGACGA GGCCGTGCAC ATCGGCGCTG CGCCCAGCCG CGAGTCGTAT
CTGCTGGCCG ACAAGATCAT TGCCGCCTGC AAGCAGACCG GCGCGCAGGC CGTGCACCCA
GGCTACGGCT TCCTGTCCGA GAACGAAGCC TTCGCCAAGC GGGTGGAGGA GGAGGGCATC
GTCTTCATTG GCCCCAAGCA TGCGGCGATC GCCGCCATGG GCGACAAGAT CGCTTCCAAG
AAGCTGGCCA ACCAGGCGGG CGTGAACACC ATCCCCGGAT ACAACGACCC CATCGCCGGG
CCCGAGGCCG CGGTGGAGAT CGCCAAGGGC ATCGGCTACC CGGTGATGAT CAAGGCCTCG
GCCGGTGGCG GCGGCAAGGG CCTGCGCGTG GCGTTCAATG ACAAGGAAGC CTTTGAAGGC
TTTGCCAGTT GCCAGAACGA GGCGCGCAAC AGCTTTGGCG ACGACCGCAT CTTCATCGAG
AAGTTCGTGC AGGAGCCGCG CCACATCGAG ATCCAGGTGC TGGGCGACGC CCACGGCAAC
GTGATCTACC TGAACGAGCG CGAATGCTCC ATCCAGCGTC GCCACCAAAA GGTGATCGAG
GAAGCGCCAT CCCCCTTCAT CAGCGACGCC ACCCGCAAGG CCATGGGCGA GCAGGCCGTG
GCCCTGGCCA AGGCCGTGGG CTACCAAAGC GCCGGCACGG TGGAGTTCGT GGTCGGCAAG
GACCAGGACT TCTACTTCCT GGAGATGAAC ACCCGCCTGC AGGTGGAGCA CCCGGTGACC
GAGTGCATCA CCGGCCTGGA TCTGGTGGAA CTCATGATCC GCGTGGCCGC CGGCGAAAAG
CTCGCCATCC GCCAGGAAGA CGTGAAGCGC GACGGCTGGG CCATCGAGTG TCGCATCAAC
GCCGAGGACC CGTTCCGCAA CTTCCTGCCC TCCACCGGAC GGCTGGTGCG TTTCCAGGCG
CCGGAGGAGT CCATGTTCCA GGGCGACACG ACCAAGAAGT ATGGCGTGCG CGTGGACACG
GGTGTGTTCG AAGGCGGTGA GATCCCGATG TACTACGACT CGATGATCGC CAAGCTCATC
GTGCACGGCC AGGACCGCAA CGACGCCATC GAGAAGATGC GCGCCGCGCT CAACGGCTTC
GTGATCCGCG GCATCAGCAG CAACATCCCT TTCCAGGCGG CGCTGCTGGC GCACCCGAAA
TTCGTGGCCG GCCAGTTCAA CACCGGCTTC ATTGCCGAGC ACTACAGCAA GGGCTTCGCC
GCCGAAGACG TGCCGCACGA CGATCCGCTG TTCCTGGTGG CACTGGCGGC GTACATGAAC
CGCCGCTACC GCGCGCGTGC ATCGGGCATC AGCGGCCAGC TCACGGGTCA TGAGGTGCAG
GTGGGCGCGC AGTTCACCGT GGTGGTGCTG GGCGCGCAGG GCAACAACAT CCACCATGAA
GTGACGGTCA CCGACTATGA GCCAGAGAGC CGCTCCAGCG CCGTGACCAT CGGCAACACC
ACCTACCGCA TCAGCAGTAC GGCCGGCCTG GGCGACATCC GCGTGCAGGG GCAGTGCAAC
GGCAAGGGCT TCACGGCGCA GGTGGAGCGC GGTACGGCCA AGAACCCGCT GGCGCTGCGC
ATCAGCCACA ACGGTACGCA GATCGACGCG CTGGTGCTGT CGCCGCTGGG CGCAAGGTTG
CACCAGCTCA TGCCCTTCAA GGCGCCACCG GACCTGTCCA AGTTCCTGCT GTCGCCCATG
CCGGGCCTGC TGGTGGACGT CGCGGTGCAG CCGGGCCAGA AGGTGCAGGC CGGCGAGAAG
CTGGCCGTGA TTGAGGCCAT GAAGATGGAG AACATCCTCT TCGCGGCGCA GGACGGCGTG
GTGGGCAAGA TCGTCGCGGG CAAGGGCGAA TCGCTGGCGG TGGATCAGGT CATCCTGGAA
TTTCAATGA
|
|---|
| Protein sequence | MFTKILIANR GEIACRVIAT AKKMGIATVA VYSDADKDAR HVKLADEAVH IGAAPSRESY
LLADKIIAAC KQTGAQAVHP GYGFLSENEA FAKRVEEEGI VFIGPKHAAI AAMGDKIASK
KLANQAGVNT IPGYNDPIAG PEAAVEIAKG IGYPVMIKAS AGGGGKGLRV AFNDKEAFEG
FASCQNEARN SFGDDRIFIE KFVQEPRHIE IQVLGDAHGN VIYLNERECS IQRRHQKVIE
EAPSPFISDA TRKAMGEQAV ALAKAVGYQS AGTVEFVVGK DQDFYFLEMN TRLQVEHPVT
ECITGLDLVE LMIRVAAGEK LAIRQEDVKR DGWAIECRIN AEDPFRNFLP STGRLVRFQA
PEESMFQGDT TKKYGVRVDT GVFEGGEIPM YYDSMIAKLI VHGQDRNDAI EKMRAALNGF
VIRGISSNIP FQAALLAHPK FVAGQFNTGF IAEHYSKGFA AEDVPHDDPL FLVALAAYMN
RRYRARASGI SGQLTGHEVQ VGAQFTVVVL GAQGNNIHHE VTVTDYEPES RSSAVTIGNT
TYRISSTAGL GDIRVQGQCN GKGFTAQVER GTAKNPLALR ISHNGTQIDA LVLSPLGARL
HQLMPFKAPP DLSKFLLSPM PGLLVDVAVQ PGQKVQAGEK LAVIEAMKME NILFAAQDGV
VGKIVAGKGE SLAVDQVILE FQ
|
|---|
| |