More than 300 homologs were found in PanDaTox collection
for query gene Dtpsy_1853 on replicon NC_011992
Organism: Acidovorax ebreus TPSY



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  79.44 
 
 
682 aa  1087    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  57.04 
 
 
667 aa  680    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  57.1 
 
 
667 aa  724    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  74.78 
 
 
675 aa  1023    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  57.66 
 
 
675 aa  714    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  85.19 
 
 
682 aa  1180    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  57.37 
 
 
681 aa  737    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  57.52 
 
 
666 aa  734    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  55.83 
 
 
660 aa  696    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  69.04 
 
 
678 aa  904    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  58.3 
 
 
666 aa  733    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  82.23 
 
 
682 aa  1144    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  68.23 
 
 
667 aa  890    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 
682 aa  1397    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  52.94 
 
 
652 aa  670    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  54.59 
 
 
671 aa  672    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  82.26 
 
 
696 aa  1142    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  57.08 
 
 
695 aa  728    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  54.76 
 
 
668 aa  651    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  57.75 
 
 
684 aa  698    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  57.75 
 
 
667 aa  699    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  69.23 
 
 
678 aa  909    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  56.73 
 
 
667 aa  717    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  58.15 
 
 
662 aa  761    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  86.51 
 
 
682 aa  1199    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  56.04 
 
 
671 aa  687    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  55.38 
 
 
671 aa  681    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  57.82 
 
 
685 aa  755    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  56.09 
 
 
673 aa  697    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  56.66 
 
 
667 aa  716    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  57.12 
 
 
667 aa  708    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  56.21 
 
 
680 aa  726    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  77.89 
 
 
684 aa  1077    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  59.16 
 
 
669 aa  746    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  69.25 
 
 
662 aa  912    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  55.13 
 
 
668 aa  687    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  54.07 
 
 
671 aa  688    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  79.44 
 
 
682 aa  1106    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  57.23 
 
 
666 aa  731    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  58.09 
 
 
673 aa  726    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  58.89 
 
 
671 aa  747    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  99.41 
 
 
682 aa  1391    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  55.52 
 
 
691 aa  671    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  55.91 
 
 
670 aa  713    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  56.09 
 
 
671 aa  687    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  56.02 
 
 
667 aa  727    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  56.91 
 
 
673 aa  704    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  57.41 
 
 
676 aa  744    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  56.27 
 
 
668 aa  706    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  54.32 
 
 
669 aa  673    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  53.91 
 
 
669 aa  676    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  54.43 
 
 
670 aa  688    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  77.83 
 
 
691 aa  1088    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  56.52 
 
 
671 aa  692    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  55.46 
 
 
671 aa  686    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  52.04 
 
 
669 aa  643    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  44.35 
 
 
656 aa  551  1e-155  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  45.55 
 
 
655 aa  550  1e-155  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  43.41 
 
 
691 aa  531  1e-149  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  43.67 
 
 
665 aa  516  1.0000000000000001e-145  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.75 
 
 
668 aa  516  1.0000000000000001e-145  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  45.61 
 
 
660 aa  518  1.0000000000000001e-145  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal 
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  45.76 
 
 
667 aa  518  1.0000000000000001e-145  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.95 
 
 
674 aa  511  1e-143  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  54.19 
 
 
498 aa  511  1e-143  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  43.81 
 
 
681 aa  508  9.999999999999999e-143  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.55 
 
 
666 aa  507  9.999999999999999e-143  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  56.39 
 
 
450 aa  508  9.999999999999999e-143  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  45.61 
 
 
679 aa  506  9.999999999999999e-143  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  46.72 
 
 
675 aa  508  9.999999999999999e-143  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3356  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.24 
 
 
672 aa  505  1e-141  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.782884 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  45.17 
 
 
662 aa  499  1e-140  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  45.75 
 
 
674 aa  498  1e-139  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  45.75 
 
 
674 aa  498  1e-139  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  44.62 
 
 
661 aa  495  1e-139  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  45.32 
 
 
662 aa  496  1e-139  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  52.98 
 
 
499 aa  497  1e-139  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  44.84 
 
 
712 aa  494  9.999999999999999e-139  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  43.07 
 
 
700 aa  492  9.999999999999999e-139  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2467  carbamoyl-phosphate synthase subunit L  44.12 
 
 
649 aa  492  9.999999999999999e-139  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.30197  normal  0.0144387 
 
 
-
 
NC_007347  Reut_A1463  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.88 
 
 
674 aa  495  9.999999999999999e-139  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5237  carbamoyl-phosphate synthase L chain, ATP-binding  45.4 
 
 
665 aa  493  9.999999999999999e-139  Burkholderia cenocepacia HI2424  Bacteria  normal  0.578975  normal  0.758885 
 
 
-
 
NC_007948  Bpro_4157  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.72 
 
 
663 aa  494  9.999999999999999e-139  Polaromonas sp. JS666  Bacteria  normal  0.825758  normal 
 
 
-
 
NC_008061  Bcen_3130  carbamoyl-phosphate synthase L chain, ATP-binding  45.4 
 
 
665 aa  493  9.999999999999999e-139  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3469  carbamoyl-phosphate synthase L chain ATP-binding  44.83 
 
 
670 aa  491  1e-137  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  42.71 
 
 
643 aa  491  1e-137  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0434  carbamoyl-phosphate synthase L chain, ATP-binding  42.38 
 
 
659 aa  489  1e-137  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.321717 
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  54.51 
 
 
450 aa  491  1e-137  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010515  Bcenmc03_5035  carbamoyl-phosphate synthase L chain ATP-binding  45.26 
 
 
665 aa  492  1e-137  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.70526  normal 
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  44.33 
 
 
661 aa  490  1e-137  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  42.82 
 
 
653 aa  486  1e-136  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  53.74 
 
 
493 aa  485  1e-135  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_007511  Bcep18194_B0426  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.49 
 
 
665 aa  485  1e-135  Burkholderia sp. 383  Bacteria  normal  0.967801  normal 
 
 
-
 
NC_008726  Mvan_4090  carbamoyl-phosphate synthase L chain, ATP-binding  43.37 
 
 
660 aa  483  1e-135  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.734303  normal 
 
 
-
 
NC_009719  Plav_2788  carbamoyl-phosphate synthase L chain ATP-binding  42.82 
 
 
673 aa  481  1e-134  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.683073  normal  0.298513 
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  40.52 
 
 
661 aa  479  1e-134  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2694  carbamoyl-phosphate synthase L chain, ATP-binding  42.63 
 
 
661 aa  481  1e-134  Pseudomonas mendocina ymp  Bacteria  normal  0.250479  normal  0.322946 
 
 
-
 
NC_009720  Xaut_1855  carbamoyl-phosphate synthase L chain ATP-binding  45.96 
 
 
666 aa  479  1e-134  Xanthobacter autotrophicus Py2  Bacteria  normal  0.181486  normal 
 
 
-
 
NC_008345  Sfri_2730  carbamoyl-phosphate synthase L chain, ATP-binding  41.16 
 
 
676 aa  482  1e-134  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  52.55 
 
 
446 aa  481  1e-134  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
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