More than 300 homologs were found in PanDaTox collection
for query gene Mpe_A1017 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  57.99 
 
 		 666 aa  734    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal  1 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  56.19 
 
 		 684 aa  678    Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  57.48 
 
 		 666 aa  727    Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  56.57 
 
 		 670 aa  712    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  58.2 
 
 		 667 aa  739    Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  55.41 
 
 		 671 aa  697    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  57.75 
 
 		 667 aa  734    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  54.16 
 
 		 669 aa  664    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  58.64 
 
 		 666 aa  738    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  56.19 
 
 		 667 aa  670    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  74.78 
 
 		 682 aa  1021    Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  68.71 
 
 		 678 aa  919    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  56.19 
 
 		 667 aa  678    Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.390977 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  55.13 
 
 		 675 aa  695    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  68.15 
 
 		 667 aa  894    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  67.41 
 
 		 662 aa  910    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  58.05 
 
 		 667 aa  736    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  53.52 
 
 		 671 aa  666    Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  0.124901 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  75.22 
 
 		 682 aa  1029    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal  1 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  52.83 
 
 		 652 aa  656    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  58.14 
 
 		 695 aa  733    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  70.38 
 
 		 696 aa  961    Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  58.53 
 
 		 685 aa  755    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal  1 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  56.5 
 
 		 681 aa  721    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal  1 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  58.39 
 
 		 669 aa  734    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.0599498 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  56.62 
 
 		 673 aa  704    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  55.12 
 
 		 671 aa  682    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  58.58 
 
 		 662 aa  754    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  57.08 
 
 		 667 aa  706    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  55.28 
 
 		 671 aa  691    Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.60166 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  54.72 
 
 		 673 aa  670    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  57.92 
 
 		 671 aa  731    Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.187116 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  77.13 
 
 		 691 aa  1056    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  55.77 
 
 		 680 aa  712    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal  1 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  74.01 
 
 		 684 aa  1025    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  68.96 
 
 		 678 aa  925    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  73.69 
 
 		 682 aa  1008    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  74.63 
 
 		 682 aa  1020    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal  1 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  55.12 
 
 		 671 aa  688    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal  1 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  76.28 
 
 		 682 aa  1045    Polaromonas sp. JS666  Bacteria  normal  1  normal  0.283926 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  53.42 
 
 		 669 aa  660    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  75.07 
 
 		 682 aa  1033    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  55.12 
 
 		 691 aa  669    Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0379768 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  56.05 
 
 		 671 aa  698    Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.519853 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  55.54 
 
 		 671 aa  686    Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  74.63 
 
 		 682 aa  1020    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  51.4 
 
 		 669 aa  639    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.0501395 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  56.11 
 
 		 676 aa  726    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  53.22 
 
 		 668 aa  650    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal  1 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  54.64 
 
 		 668 aa  654    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal  1 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  57.39 
 
 		 673 aa  721    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.776074 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  55.12 
 
 		 670 aa  692    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  55.6 
 
 		 660 aa  672    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  57.16 
 
 		 667 aa  701    Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  100 
 
 		 675 aa  1384    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.848501 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  53.62 
 
 		 668 aa  637    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  44.66 
 
 		 655 aa  558  1e-157  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  1  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  43.05 
 
 		 656 aa  542  1e-153  Ehrlichia canis str. Jake  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  42.65 
 
 		 691 aa  534  1e-150  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  47.02 
 
 		 667 aa  520  1e-146  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.44 
 
 		 666 aa  511  1e-143  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  43.68 
 
 		 681 aa  507  9.999999999999999e-143  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  46.64 
 
 		 712 aa  504  1e-141  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  53.85 
 
 		 498 aa  501  1e-140  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  46.89 
 
 		 679 aa  500  1e-140  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.73 
 
 		 674 aa  493  9.999999999999999e-139  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2694  carbamoyl-phosphate synthase L chain, ATP-binding  43.82 
 
 		 661 aa  494  9.999999999999999e-139  Pseudomonas mendocina ymp  Bacteria  normal  0.250479  normal  0.322946 
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  44.22 
 
 		 662 aa  494  9.999999999999999e-139  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  54.82 
 
 		 450 aa  492  9.999999999999999e-139  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  46.37 
 
 		 660 aa  494  9.999999999999999e-139  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal  1 
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  46.51 
 
 		 674 aa  491  1e-137  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  53.3 
 
 		 499 aa  490  1e-137  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_013457  VEA_000380  methylcrotonyl-CoA carboxylase biotin-containing subunit  42.54 
 
 		 686 aa  490  1e-137  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  53.1 
 
 		 446 aa  486  1e-136  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_006368  lpp1792  hypothetical protein  41.3 
 
 		 654 aa  486  1e-136  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  52.23 
 
 		 493 aa  486  1e-136  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal  1 
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  46.12 
 
 		 674 aa  487  1e-136  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  44.26 
 
 		 661 aa  488  1e-136  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  44.44 
 
 		 662 aa  488  1e-136  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  42.84 
 
 		 665 aa  488  1e-136  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.434229 
 
 
-
 
NC_006369  lpl1793  hypothetical protein  40.92 
 
 		 654 aa  483  1e-135  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  53.1 
 
 		 448 aa  485  1e-135  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  41.86 
 
 		 689 aa  483  1e-135  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  52.65 
 
 		 446 aa  480  1e-134  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_009635  Maeo_1006  pyruvate carboxylase subunit A  54.95 
 
 		 509 aa  481  1e-134  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  44.15 
 
 		 661 aa  481  1e-134  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal  1 
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  43.26 
 
 		 652 aa  479  1e-134  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  43.26 
 
 		 653 aa  479  1e-134  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal  1 
 
 
-
 
NC_007517  Gmet_0984  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  52.43 
 
 		 446 aa  481  1e-134  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000016105  normal  0.0128167 
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.44 
 
 		 668 aa  481  1e-134  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  53.7 
 
 		 480 aa  481  1e-134  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_008044  TM1040_0738  3-methylcrotonoyl-CoA carboxylase, alpha subunit  43.65 
 
 		 645 aa  481  1e-134  Ruegeria sp. TM1040  Bacteria  normal  0.623779  normal  1 
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  45.64 
 
 		 675 aa  478  1e-133  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  40.82 
 
 		 661 aa  478  1e-133  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_3200  carbamoyl-phosphate synthase L chain, ATP-binding  43.26 
 
 		 664 aa  478  1e-133  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0237038  normal  0.361734 
 
 
-
 
NC_007954  Sden_2248  carbamoyl-phosphate synthase L chain, ATP-binding  41.35 
 
 		 697 aa  476  1e-133  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  54.17 
 
 		 450 aa  478  1e-133  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2325  3-methylcrotonoyl-CoA carboxylase, alpha subunit  43.11 
 
 		 679 aa  476  1e-133  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.676879 
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  40.82 
 
 		 661 aa  478  1e-133  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_4351  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.43 
 
 		 677 aa  475  1e-132  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
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