More than 300 homologs were found in PanDaTox collection
for query gene Pnuc_0913 on replicon NC_009379
Organism: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  58.82 
 
 
660 aa  734    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  68.19 
 
 
691 aa  912    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  59.5 
 
 
666 aa  759    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  59.06 
 
 
667 aa  759    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  57.39 
 
 
681 aa  735    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  56.7 
 
 
684 aa  699    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  58.91 
 
 
671 aa  756    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  66.27 
 
 
667 aa  860    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  58.62 
 
 
667 aa  758    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  58.62 
 
 
667 aa  751    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  55.95 
 
 
671 aa  700    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  56.11 
 
 
668 aa  677    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  54.9 
 
 
652 aa  705    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  56.98 
 
 
667 aa  709    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  59.12 
 
 
695 aa  742    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  69.04 
 
 
662 aa  914    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  66.43 
 
 
682 aa  889    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  57.86 
 
 
662 aa  749    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  54.55 
 
 
669 aa  686    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  68.75 
 
 
682 aa  900    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  56.7 
 
 
671 aa  703    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  57.21 
 
 
671 aa  717    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  94.4 
 
 
678 aa  1320    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  57.31 
 
 
673 aa  718    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  65.89 
 
 
682 aa  873    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  64.77 
 
 
696 aa  860    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  68.96 
 
 
675 aa  924    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  56.28 
 
 
680 aa  729    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  66.42 
 
 
684 aa  874    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  69.04 
 
 
682 aa  903    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  53.96 
 
 
669 aa  683    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  57.73 
 
 
675 aa  730    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  56.83 
 
 
667 aa  691    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  57.29 
 
 
671 aa  717    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  66.47 
 
 
682 aa  878    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  58.8 
 
 
685 aa  774    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  100 
 
 
678 aa  1398    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  59.29 
 
 
666 aa  742    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  59 
 
 
666 aa  742    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  57.35 
 
 
691 aa  704    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  57.83 
 
 
670 aa  740    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  56.29 
 
 
671 aa  705    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  53.82 
 
 
668 aa  643    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  56.76 
 
 
673 aa  706    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  57.29 
 
 
671 aa  725    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  56.7 
 
 
667 aa  699    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  56.87 
 
 
676 aa  747    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  55.83 
 
 
668 aa  707    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  68.36 
 
 
682 aa  892    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  57.31 
 
 
673 aa  729    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  55.3 
 
 
670 aa  711    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  69.29 
 
 
682 aa  909    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  56.85 
 
 
671 aa  704    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  58.09 
 
 
667 aa  738    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  57.46 
 
 
669 aa  742    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  50 
 
 
669 aa  620  1e-176  Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  47.19 
 
 
655 aa  585  1e-166  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  44.01 
 
 
691 aa  559  1e-158  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  45.33 
 
 
656 aa  558  1e-158  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  43.66 
 
 
689 aa  531  1e-149  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  56.33 
 
 
498 aa  525  1e-147  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  57.01 
 
 
493 aa  516  1.0000000000000001e-145  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  54.98 
 
 
448 aa  517  1.0000000000000001e-145  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  44.18 
 
 
661 aa  513  1e-144  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  54.98 
 
 
446 aa  513  1e-144  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  54.16 
 
 
499 aa  515  1e-144  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  43.35 
 
 
661 aa  510  1e-143  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  56.79 
 
 
450 aa  509  1e-143  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  41.82 
 
 
665 aa  509  1e-143  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_007517  Gmet_0984  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  54.3 
 
 
446 aa  505  9.999999999999999e-143  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000016105  normal  0.0128167 
 
 
-
 
NC_010814  Glov_1598  acetyl-CoA carboxylase, biotin carboxylase  54.98 
 
 
446 aa  508  9.999999999999999e-143  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000269909  n/a   
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  44.79 
 
 
662 aa  508  9.999999999999999e-143  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  54.52 
 
 
446 aa  508  9.999999999999999e-143  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_010001  Cphy_0521  acetyl-CoA carboxylase, biotin carboxylase  53.38 
 
 
448 aa  503  1e-141  Clostridium phytofermentans ISDg  Bacteria  normal  0.0922671  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  58.51 
 
 
667 aa  504  1e-141  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1792  hypothetical protein  41.82 
 
 
654 aa  499  1e-140  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_1521  acetyl-CoA carboxylase, biotin carboxylase  55.43 
 
 
494 aa  500  1e-140  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2877  acetyl-CoA carboxylase biotin carboxylase subunit  55.51 
 
 
450 aa  502  1e-140  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0201328  n/a   
 
 
-
 
NC_008816  A9601_00721  acetyl-CoA carboxylase biotin carboxylase subunit  52.58 
 
 
449 aa  499  1e-140  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.249054  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4036  acetyl-CoA carboxylase biotin carboxylase subunit  55.28 
 
 
450 aa  501  1e-140  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.704131  n/a   
 
 
-
 
NC_008262  CPR_1142  biotin carboxylase  54.44 
 
 
450 aa  499  1e-140  Clostridium perfringens SM101  Bacteria  normal  0.123284  n/a   
 
 
-
 
NC_008819  NATL1_01241  acetyl-CoA carboxylase biotin carboxylase subunit  52.04 
 
 
447 aa  495  1e-139  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.114391  normal 
 
 
-
 
NC_003909  BCE_4257  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  498  1e-139  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  42.77 
 
 
681 aa  498  1e-139  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4314  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  498  1e-139  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2736  biotin carboxylase/biotin-containing subunit  43.03 
 
 
649 aa  496  1e-139  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4088  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  498  1e-139  Bacillus anthracis str. Sterne  Bacteria  normal  0.857492  n/a   
 
 
-
 
NC_011726  PCC8801_1426  acetyl-CoA carboxylase biotin carboxylase subunit  54.18 
 
 
449 aa  496  1e-139  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_005957  BT9727_3926  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  498  1e-139  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3937  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  498  1e-139  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1793  hypothetical protein  41.69 
 
 
654 aa  498  1e-139  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A4294  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  497  1e-139  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  42.77 
 
 
643 aa  496  1e-139  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3289  acetyl-CoA carboxylase, biotin carboxylase  54.72 
 
 
496 aa  498  1e-139  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.191323 
 
 
-
 
NC_007530  GBAA_4408  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  498  1e-139  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0940  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  497  1e-139  Bacillus cereus G9842  Bacteria  normal  normal  0.0173318 
 
 
-
 
NC_013037  Dfer_3259  Carbamoyl-phosphate synthase L chain ATP- binding  53.52 
 
 
501 aa  497  1e-139  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0256085 
 
 
-
 
NC_008261  CPF_1330  biotin carboxylase  54 
 
 
450 aa  496  1e-139  Clostridium perfringens ATCC 13124  Bacteria  normal  0.110038  n/a   
 
 
-
 
NC_011773  BCAH820_4204  acetyl-CoA carboxylase biotin carboxylase subunit  55.06 
 
 
450 aa  498  1e-139  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000322811 
 
 
-
 
NC_009635  Maeo_1006  pyruvate carboxylase subunit A  54.87 
 
 
509 aa  498  1e-139  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
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