| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2131 |
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| Symbol | |
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| ID | 7973817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2275940 |
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| End bp | 2277988 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792718 |
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| Product | acetyl-CoA carboxylase, biotin carboxylase |
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| Protein accession | YP_002944032 |
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| Protein GI | 239815122 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGA AGATACTGAT CGCCAACCGC GGCGAAATCG CCTGCCGTGT GATCCAGACC
GCGAAGAAGA TGGGCATCCT CACCGTCGCG GTCTACTCCG ACGCCGACAA GGAAGCCCGC
CACGTCGAGC TGGCCGACGA GGCCGTGCAC ATCGGTGCCG CGCCCAGCCG CGAGAGCTAC
CTGCAAGCGG ACCGCATCAT CGCGGCCTGC AAGCAGACGG GCGCCGAGGC GGTGCACCCG
GGCTACGGCT TTCTGTCGGA GAACGAAGCC TTCGCGCGCA AGGTCGAGGA AGAGGGCATT
GCCTTCATCG GACCCAAGCA CTATTCGATC GCGGCCATGG GCGACAAGAT CGCCTCCAAG
AAGCTCGCGA ACGAGGCCAA GGTCAACACC ATCCCGGGCT GGAACGACGC CATCGAGACG
GCCGAGCGCG CGGTCGAGAT CGCCAAGGAC ATCGGCTACC CGGTGATGAT CAAGGCCTCG
GCCGGCGGCG GCGGCAAGGG CCTGCGCGTG GCCTACAACG ACAAGGAGGC CTTCGAGGGC
TTCACCTCGT GCCGCAACGA GGCACTGAGC AGCTTCGGCG ACGACCGCGT GTTCATCGAG
AAGTTCGTCG AGGAGCCGCG CCACATCGAG ATCCAGGTGC TGGGCGATTC CCACGGCAAC
GTCATCTACC TGAACGAGCG CGAATGCTCG ATCCAGCGCC GCCACCAGAA GGTGATCGAG
GAGGCGCCTT CGCCGTTCAT CAGCGACGCC ACGCGCCGTG CGATGGGCGA GCAGGCGGTG
CAGTTGGCCA AGGCCGTGAA GTACCAGAGC GCGGGCACGG TGGAGTTCGT GGTCGGCAAG
GACCAGAGCT TCTACTTTCT GGAGATGAAC ACGCGGCTGC AGGTGGAGCA CCCGGTGACC
GAATGCATCA CGGGGCTCGA TCTTGTCGAG CTGATGATCC GCGTGGCGGC CGGCGAGGAA
CTGCCGCTCA CGCAGGAACA GGTGAAGCGC AACGGCTGGG CCATCGAGTG CCGCATCAAT
GCCGAGGACC CGTTCCGCAA TTTCCTGCCT TCGACCGGCC GCCTCGTGAA GTTCCAGCCG
CCGGCCGAGA CCATGTTCGC AGCCGACACC GAGCGCCTGA ACGGCGTGCG CGTGGACACC
GGCGTGTACG ACGGCGGCGA GATCCCGATG TACTACGACT CGATGATCGC CAAGCTCATC
GTGCACGGCA AGGATCGCCA GCATGCGATT GCCCGCATGC GAGAGGCGCT CAACGGCTTC
GTGATCCGCG GCATCAGCAG CAACATCCCG TTCCAGGCCG CGCTGCTCGC GCATCCGAAG
TTCGTGGCGG GCGATTTCAA CACCGGCTTC ATCGCCGAGC ACTACGGCAA GGGCTTCCAT
GCGGAAGACG TGCCGCACGC CGATCCGGCT TTCCTGATTG CGCTTGCGGC CTATGTGCAC
CGCCGCTATC GCGCGCGGGC CTCCGGCATC AGCGGACAGC TCGAAGGCCA CGGCGTGAAG
GTGGGCGAGC AGTTCGTGGT GGTGGAGCTG GGGCCGGAGG GCAAGCATGT GCACCATCCG
GTGTCGGTCA CCGACTTCCA TGGCAAGACC GGCGCCAGCG CCGTGGCCGT GGGCGGCAAG
AGCTACAAGA TCGACAGCGG CTTTGCGCTC GGCGCCATTC GCGTGCAGGG CATGGTCAAC
GACCGGCCCT TCACCGCGCA GGTCGAGCGC GGTGCCGGCA AGAACCCGCT GGCGCTGCGC
GTGTCCCACG ACGGCACGCA GATCGAGGCG ATGGTGCTGT CGCCCCTGGG TGCGCGCCTG
CTCGAGCTGA TGCCCTACAA GGCCCCGCCC GACCTGAGCA AGTTCCTGAT GTCGCCCATG
CCGGGCCTGT TGGTCGAGGT GTCGGTGCAG CCGGGGCAGC AGGTGCGCGC CGGCGAGAAG
CTGGCCGTGA TCGAGGCCAT GAAGATGGAG AACGTGCTGT TCGCCACGCA AGACGGCGTG
GTCGGCAAAA TTTCGGCCAA CAAGGGCGAG TCGCTCGCGG TCGATCAAAT TATTCTGGAG
TTCAACTGA
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| Protein sequence | MFKKILIANR GEIACRVIQT AKKMGILTVA VYSDADKEAR HVELADEAVH IGAAPSRESY
LQADRIIAAC KQTGAEAVHP GYGFLSENEA FARKVEEEGI AFIGPKHYSI AAMGDKIASK
KLANEAKVNT IPGWNDAIET AERAVEIAKD IGYPVMIKAS AGGGGKGLRV AYNDKEAFEG
FTSCRNEALS SFGDDRVFIE KFVEEPRHIE IQVLGDSHGN VIYLNERECS IQRRHQKVIE
EAPSPFISDA TRRAMGEQAV QLAKAVKYQS AGTVEFVVGK DQSFYFLEMN TRLQVEHPVT
ECITGLDLVE LMIRVAAGEE LPLTQEQVKR NGWAIECRIN AEDPFRNFLP STGRLVKFQP
PAETMFAADT ERLNGVRVDT GVYDGGEIPM YYDSMIAKLI VHGKDRQHAI ARMREALNGF
VIRGISSNIP FQAALLAHPK FVAGDFNTGF IAEHYGKGFH AEDVPHADPA FLIALAAYVH
RRYRARASGI SGQLEGHGVK VGEQFVVVEL GPEGKHVHHP VSVTDFHGKT GASAVAVGGK
SYKIDSGFAL GAIRVQGMVN DRPFTAQVER GAGKNPLALR VSHDGTQIEA MVLSPLGARL
LELMPYKAPP DLSKFLMSPM PGLLVEVSVQ PGQQVRAGEK LAVIEAMKME NVLFATQDGV
VGKISANKGE SLAVDQIILE FN
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