| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0723 |
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| Symbol | pccA |
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| ID | 5711158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 729769 |
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| End bp | 731814 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266631 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001532069 |
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| Protein GI | 159043275 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.124518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA AAATCCTGAT TGCCAACCGT GGCGAGATTG CCTGCCGGGT CATAAAGACC
GCGCGCAAGA TGGGCATCCA GACGGTTGCG ATCTATTCGG ATGCGGACCG CAATGCGCTG
CATGTGCGGA TGGCCGATGA GGCGGTGCAT ATCGGCCCGT CGCCCGCCAA CCAGTCCTAT
ATCGTGATCG ACAAGGTGAT GGACGCCATC CGGCAGACCG GCGCCGAGGC GGTGCATCCG
GGCTACGGCT TCCTGTCCGA GAACAAGCTC TTCGCCGAGG CGCTGGAGAA AGAGGGCGTG
GCCTTCATCG GGCCGCCCGC GAATGCCATC GAGGCGATGG GCGACAAGAT CACCTCCAAG
AAGATCGCGC AGGAGGCGAA CGTCTCCACC GTCCCGGGCT ATATGGGGTT GATCGCGGAT
GCGGACGAGG CGGTGAAGAT CTCGGGCGAG ATCGGCTACC CGGTGATGAT CAAGGCCTCC
GCCGGGGGCG GCGGCAAGGG GATGCGGATC GCCTGGAACG ACGCCGAGGC GCGCGAGGGC
TTCCAGAGCT CCAAGAACGA GGCGGCGAAT TCTTTCGGCG ACGACCGGAT CTTCATCGAG
AAATTCGTCA CCCAACCGCG CCATATCGAG ATCCAGGTGC TGGCCGATAC CCATGGCAAC
TGCATCTACC TGGGCGAGCG GGAGTGTTCG ATCCAGCGCC GCAACCAGAA GGTGGTCGAG
GAAGCGCCCA GCCCGTTCCT CGACGAGGCA ACCCGCAAGG CGATGGGGGA GCAGTCCTGC
GCCCTGGCCC AGGCCGTGGG CTATGCCAGC GCCGGGACCG TGGAATTCAT CGTCGATGGC
GACCGGAATT TCTATTTCCT CGAGATGAAC ACGCGGCTCC AGGTGGAACA CCCGGTGACC
GAACTGATTA CCGGCGTCGA CCTGGTGGAG CAGATGATCC GCGTGGCGGC CGGGGAAAAG
CTGCCCATGA CCCAGGACGA TGTGACCCTG ACCGGCTGGG CCATCGAGAA CCGGCTTTAC
GCCGAGGACC CCTATCGCAA CTTTCTGCCC TCCATCGGGC GGCTCACGCG CTACCGCCCG
CCGGTCGAGG TCGCGGCAGG ACCTCTGGAG GCCAATGGCA AATGGCATGG CGATGCCCCC
AGCGGCCCGA CGGCGGTGCG CAACGATACC GGCGTCTACG AGGGCGGCGA GATCAGCATG
TACTACGACC CGATGATCGC CAAGCTCTGT ACCTGGGGGC CGGACCGCCC GGCGGCGATC
GAGGCGATGC GCAACGCGCT CGACGGGTTC GAGGTCGAGG GGATCGGCCA CAACCTGCCC
TTCGTGGCGG CGGTGATGGA CCACCCGGTC TTCATCAAGG GCGAGATGAC CACCGCCTTC
ATCAAAGAGC AGTACCCCGA CGGCTTCGAG GGCGTGACCC TCGGCGCGGC CGACCTGACA
CGGCTTGCGG CGGCGGCGGC GGCGATGTTC CGGGTGGCAG AGATCCGGCG CACCCGCATT
TCCGGTACGC TCGACAACCA CGAGCGGATG GTCGGCACCG ACTGGGTCGT GACCGCCCAG
GATGCCCGGT TCGATGTGAC CATCGACGCG GATCCGGGCG GCTCCACCGT GCGCTTCGCC
GACGGGACCG CCCACCGGGT GACCAGCCGC TGGACCCCGG GCGACAGCCT CGCCACGGTC
GAGATCGACG GTGCGCCAAT GGTGCTCAAG GTGGACAAGA TCACCAGCGG TTTCCGGATG
CGGTTCCGCG GAGCGGATGT GAAGGTCCAT GTCCGCACCC CGCGCCAGGC CGAACTGAAT
GACCTGATGC CCGAGAAGCT GCCGCCGGAT ACGTCGAAGA TGCTGCTCTG CCCGATGCCG
GGGCTGGTGG TGAAGATCGA CGTGGAGGTC GGCGACGAGG TGCAGGAGGG CCAGGCGCTC
TGTACCGTGG AGGCGATGAA GATGGAGAAC ATCCTGCGCG CCGAAAAGAC CGCCACGGTC
ACCAAGATCA ACGCCGGTGC CGGCGACAGC CTCGCGGTGG ACGACGTGAT CATGGAGTTC
GAGTGA
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| Protein sequence | MFKKILIANR GEIACRVIKT ARKMGIQTVA IYSDADRNAL HVRMADEAVH IGPSPANQSY
IVIDKVMDAI RQTGAEAVHP GYGFLSENKL FAEALEKEGV AFIGPPANAI EAMGDKITSK
KIAQEANVST VPGYMGLIAD ADEAVKISGE IGYPVMIKAS AGGGGKGMRI AWNDAEAREG
FQSSKNEAAN SFGDDRIFIE KFVTQPRHIE IQVLADTHGN CIYLGERECS IQRRNQKVVE
EAPSPFLDEA TRKAMGEQSC ALAQAVGYAS AGTVEFIVDG DRNFYFLEMN TRLQVEHPVT
ELITGVDLVE QMIRVAAGEK LPMTQDDVTL TGWAIENRLY AEDPYRNFLP SIGRLTRYRP
PVEVAAGPLE ANGKWHGDAP SGPTAVRNDT GVYEGGEISM YYDPMIAKLC TWGPDRPAAI
EAMRNALDGF EVEGIGHNLP FVAAVMDHPV FIKGEMTTAF IKEQYPDGFE GVTLGAADLT
RLAAAAAAMF RVAEIRRTRI SGTLDNHERM VGTDWVVTAQ DARFDVTIDA DPGGSTVRFA
DGTAHRVTSR WTPGDSLATV EIDGAPMVLK VDKITSGFRM RFRGADVKVH VRTPRQAELN
DLMPEKLPPD TSKMLLCPMP GLVVKIDVEV GDEVQEGQAL CTVEAMKMEN ILRAEKTATV
TKINAGAGDS LAVDDVIMEF E
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