Gene Mnod_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1878 
Symbol 
ID7305908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1981045 
End bp1983066 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content70% 
IMG OID643599613 
ProductCarbamoyl-phosphate synthase L chain ATP-binding 
Protein accessionYP_002497171 
Protein GI220921870 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.241293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACA AGATCCTGAT CGCAAACCGG GGCGAGATCG CCTGCCGCAT CATCAAGACG 
GCGCGGCGGA TGGGGATCAA GACGGTCGCG GTCTATTCCG ACGCCGACCG GGACGCGGTG
CACGTGTCGC TCGCCGACGA GGCCGTCCAT ATCGGCCCCG CGCCCGCCGC CCAGTCCTAC
CTCGTGATCG AGAAGATCAT CGAGGCCTGC AAGAGGACCG GCGCGCAGGC GGTGCATCCG
GGCTACGGCT TCCTCTCCGA GCGCGAGGCC TTCCCGAAGG CGCTGGCCGA GGCCGGCATC
GTGTTCATCG GCCCGAACCC GGGCGCGATT GCCGCGATGG GCGACAAGAT CGAGTCGAAG
AAGGCGGCCT CCGCGGCACG CGTCTCGACC GTGCCGGGCT TCCTCGGCGT GATCGAGAGC
CCCGAGCATG CGGTCCAGAT CGCCGACGAG ATCGGCTATC CGGTGATGAT CAAGGCCTCG
GCGGGTGGCG GCGGCAAGGG CATGCGCATC GCGCATTCGG CGGCCGAGGT GGCGGAGGGC
TTCGCCCGCG CCCGCTCGGA GGCGGCCTCG TCCTTCGGCG ACGACCGGGT CTTCATCGAG
AAGTTCATCA CCGACCCGCG CCACATCGAG ATCCAGGTCA TCGGCGACAA GCACGGCAAC
GTGATCTATC TCGGCGAGCG CGAGTGCTCG ATCCAGCGCC GCAACCAGAA GGTCATCGAG
GAGGCGCCGT CGCCCCTCCT CGACGAGGAG ACCCGCCGCA GGATGGGCGA GCAGGCGGTC
GCGCTGGCGC GTGCGGTGCA CTACGATTCC GCCGGCACCG TCGAGTTCGT CGCCGGCCAG
GACAAGTCCT TCTACTTCCT GGAGATGAAC ACCCGGCTCC AGGTGGAGCA CCCGGTGACC
GAGATGATCA CCGGCCTCGA TCTCGTCGAG CTGATGATCC GGGTGGCGGC CGGCGAGATG
CTGCCGCTGA CCCAGGACGA CGTGAGACTC GACGGCTGGG CGGTCGAGAG CCGCGTCTAC
GCCGAGGACC CGACCCGCAA CTTCCTGCCC TCGATCGGCC GGCTCACCAC CTACCGCCCG
CCGGCGGAGG GCGCGCATGG CAGCGCCATC ATCCGCAAGG ACACCGGAGT CGAGGAGGGG
AGCGAGATCG CGATCCACTA CGATCCGATG ATCGCCAAGC TCGTCACCTG GGCGCCGACC
CGCGACGAGG CGATCAGCGC GCAAGGAGAG GCCCTCGACG CCTTCGCCAT CGACGGCATC
CGCCACAACA TCCCGTTCCT CGCCGCGCTC ATGCAGCATC CGCGCTGGCA GGAGGGCCGG
CTCTCCACCG GCTTCATCGC GGAGGAATTC CCGAACGGCT TCGAGGCGCC GGTGCCGGCG
GGCGAGGTAG CCCTGCGGAT GGTGGCGGCG GCGGCGGTCA TCGACCACGT GCTCAACGAG
CGCAAGCGCG GCATCTCGGG CCAGATGCGC GACCCCAAGC ACCTGCGCTT CGAGCGCGAC
CGGGTGGTGT GGCTCGGCGA CCAGCGCTTC GAGGCGACGG TGGAGACGAT CGAGGCCGGC
CGAGGGCCGG CGAACGGGAT CGCGGTCGCC TTCGCGGACG GCACGACCTG GACGGTCGAG
AGCGGGTGGC GGCCGGGCGA GCCGGTCTGG ACGGGCACGA TCGGCGGCGC CCGGGCGGCG
ATCCAGGTGC GCCCCCTCCT CAACGGCGTC TTCCTGCAGC ATGCGGGCGC GGCCGCCGAG
GCGCGGGTCT ACACGCGGCG CGAGGCGGAG CTCGCGGCGC TGATGCCGAT CAAGGAGGTC
GGCGGCTCGG GCAAGCAGCT GCTCTGCCCG ATGCCCGGCC TCGTGAAGAG CATCATGGTT
ACGCCCGGCC AGGAGGTGAA GGCGGGCGAA CCGCTCGCCA TCGTCGAGGC CATGAAGATG
GAGAACGTGC TGCGCGCCGA GCGCGACGGC ACGGTGCAGA CCATCCAGGC CAAGGAGGGC
GACAGCCTCG CGGTCGATGC GGTGATCCTC GAATTCGCCT GA
 
Protein sequence
MFDKILIANR GEIACRIIKT ARRMGIKTVA VYSDADRDAV HVSLADEAVH IGPAPAAQSY 
LVIEKIIEAC KRTGAQAVHP GYGFLSEREA FPKALAEAGI VFIGPNPGAI AAMGDKIESK
KAASAARVST VPGFLGVIES PEHAVQIADE IGYPVMIKAS AGGGGKGMRI AHSAAEVAEG
FARARSEAAS SFGDDRVFIE KFITDPRHIE IQVIGDKHGN VIYLGERECS IQRRNQKVIE
EAPSPLLDEE TRRRMGEQAV ALARAVHYDS AGTVEFVAGQ DKSFYFLEMN TRLQVEHPVT
EMITGLDLVE LMIRVAAGEM LPLTQDDVRL DGWAVESRVY AEDPTRNFLP SIGRLTTYRP
PAEGAHGSAI IRKDTGVEEG SEIAIHYDPM IAKLVTWAPT RDEAISAQGE ALDAFAIDGI
RHNIPFLAAL MQHPRWQEGR LSTGFIAEEF PNGFEAPVPA GEVALRMVAA AAVIDHVLNE
RKRGISGQMR DPKHLRFERD RVVWLGDQRF EATVETIEAG RGPANGIAVA FADGTTWTVE
SGWRPGEPVW TGTIGGARAA IQVRPLLNGV FLQHAGAAAE ARVYTRREAE LAALMPIKEV
GGSGKQLLCP MPGLVKSIMV TPGQEVKAGE PLAIVEAMKM ENVLRAERDG TVQTIQAKEG
DSLAVDAVIL EFA