| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2693 |
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| Symbol | |
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| ID | 6162371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2961779 |
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| End bp | 2963854 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665470 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001791723 |
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| Protein GI | 171059374 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.25688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCA AGATCCTCAT TGCCAACCGC GGCGAAATCG CCTGCCGCGT CATCAAGACC
GCCCAGAAGA TGGGCATCAA GACGGTGGCC GTCTATTCCG AGGCCGACCG CGACGCGCGC
CACGTCGAAC TGGCTGACGA GTCCGTGCTG CTCGGCCCGG CGCCCTCGCG CGAGTCGTAT
CTGGTCGCCG ACAAGATCAT TGCCGCCTGC AAGGCCACCG GCGCCCAGGC GGTGCATCCG
GGCTACGGCT TTCTGTCCGA GAACGAGGCC TTTGCGCGCC GGCTCGAAGA AGAAGGCATC
ACCTTCATCG GCCCCAAGCA CTATTCGATC GCGGCCATGG GCGACAAGAT CGCCTCGAAG
AAGCTGGCAC TCGAAGCCAA GGTCAACACG ATCCCCGGCT ACAACAATGC CATCGACACG
CCCGAGCAGG CGGTCGAGAT CGCCAAGGGC ATCGGCTACC CGGTGATGAT CAAGGCCTCG
GCCGGCGGCG GCGGCAAAGG CCTGCGGGTC GCGTTCAATG ACAAGGAGGC CTTCGAGGGC
TTCTCGTCAT GCCGCAATGA AGCGCGCAAC AGCTTCGGCG ACGACCGCGT GTTCATCGAG
AAATACGTGC TCGAGCCGCG CCACATCGAG ATCCAGGTGC TCGGCGACAG CCACGGCAAC
GTGCTGTACC TCAATGAGCG CGAATGCTCG ATCCAGCGCC GCCACCAGAA GGTGATCGAA
GAGGCGCCGT CGCCCTTCAT CAGCGACGCC ACCCGCCGTG CGATGGGCGA GCAGGCCGTG
GCATTGGCCA AGGCCGTGAA GTACCAGAGC GCGGGCACGG TCGAGTTCGT GGTCGGCAAG
GACCAGGACT TCTATTTCCT GGAGATGAAC ACCCGCCTGC AGGTGGAGCA CCCGGTCACC
GAGTGCATCA CCGGGCTGGA CCTGGTCGAG CAGATGATCC GCGTGGCCGC CGGTGAGGCG
CTGACCTTCA AGCAGGAAGA CATCAAGCGC GACGGCTGGG CGATCGAGTG CCGCATCAAT
GCCGAGGATC CGTTTCGCAA CTTCCTGCCG TCGACCGGCC GGCTGGTGCG TTATGCACCG
CCGGCGCAGA CGCTCGAACA GTCGGTGCCC ACGCTCGAAG GCGAGGCCTA TGCGGGCGGC
GCGTTCGGCG GTGTACGCGT GGACACCGGC GTCTACGAAG GCGGCGAGAT CCCGATGTTC
TACGACTCGA TGATCGCCAA GCTGATCGTG CACGCGCGCA ACCGCACCGA GGCGATCGCC
AAGATGCGCG AGGCGCTCAA CGGCTTCGTG ATCCGCGGCA TCAGCAGCAA CATCCCGTTC
CAGGCCGCGC TGCTGGCGCA TCCGAAGTTC GTCACCGGCG AGTTCAACAC CGGCTTCATC
GCCGAACACT ATGCCCACGG CTTCAAGGCC GAGGACGTGC CGCACGACGA CCCGCTGTTC
CTGGTCGCGC TGGCCGCCTT CGTGCGCCGC AAGGCCCGCG AACGCGCGGC CGGCATCAGC
GGCCAGCTGC CCGGCCACGG CGTGAAGGAC GCGCCCAACC TGGTGGTCGC GGTGCTGGGC
GCGCAGGGTC AGCACGTCTA TCACGAGGTC ACCGTCAGCG GCTACGACGC AGTGGCCGAA
ACCGCCAACG TGATCGTGGG CGAACAGACC TACGCCATCC GCAGCCACAC CAAGCTCGGC
GACCTGCTGA TGACCGGCCT GTGCAACGGC CGGCCGTTCA TGGCGCAGGT CGAACGCGGT
TCGGCCAAGA AGCCGCTGGC GATGCGCGTG GCCCACAACG GCACGCAGAT CGAGGCGATG
GTGCTGTCGC CGCAGGCGGC GCAACTGATG AAGCTGATGC CCTACAAGGC ACCGGCCGAC
ACCAGCAAGT TCCTGCTCTC GCCGATGCCG GGCCTGCTGG CCGACGTGTC GGTGCAGGTC
GGCCAGACCG TGCAGGCGGG CGAGAAGCTC GCGGTGATCG AGGCCATGAA GATGGAGAAC
ATCCTCAGCG CCGCGCAGGA CTGCGTGGTC GCCGAGGTGC TGGCCAAGAA GGGCGAGAGC
CTGTCGGTCG ATCAGCCGAT CCTGCGGTTC GCCTGA
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| Protein sequence | MFTKILIANR GEIACRVIKT AQKMGIKTVA VYSEADRDAR HVELADESVL LGPAPSRESY
LVADKIIAAC KATGAQAVHP GYGFLSENEA FARRLEEEGI TFIGPKHYSI AAMGDKIASK
KLALEAKVNT IPGYNNAIDT PEQAVEIAKG IGYPVMIKAS AGGGGKGLRV AFNDKEAFEG
FSSCRNEARN SFGDDRVFIE KYVLEPRHIE IQVLGDSHGN VLYLNERECS IQRRHQKVIE
EAPSPFISDA TRRAMGEQAV ALAKAVKYQS AGTVEFVVGK DQDFYFLEMN TRLQVEHPVT
ECITGLDLVE QMIRVAAGEA LTFKQEDIKR DGWAIECRIN AEDPFRNFLP STGRLVRYAP
PAQTLEQSVP TLEGEAYAGG AFGGVRVDTG VYEGGEIPMF YDSMIAKLIV HARNRTEAIA
KMREALNGFV IRGISSNIPF QAALLAHPKF VTGEFNTGFI AEHYAHGFKA EDVPHDDPLF
LVALAAFVRR KARERAAGIS GQLPGHGVKD APNLVVAVLG AQGQHVYHEV TVSGYDAVAE
TANVIVGEQT YAIRSHTKLG DLLMTGLCNG RPFMAQVERG SAKKPLAMRV AHNGTQIEAM
VLSPQAAQLM KLMPYKAPAD TSKFLLSPMP GLLADVSVQV GQTVQAGEKL AVIEAMKMEN
ILSAAQDCVV AEVLAKKGES LSVDQPILRF A
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