| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4238 |
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| Symbol | |
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| ID | 5318282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 721133 |
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| End bp | 723145 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776043 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001312976 |
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| Protein GI | 150376380 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA TGTTCAAGAA AATCCTCATT GCCAATCGTG GTGAAATCGC CTGCCGCGTC
ATCCGCACAG CGAAGTCTCT CGACATCCCG ACCGTCGCCG TCTACTCGGA TGCGGACCGC
GACGCGATGC ATGTGCGCAT GGCGGACGAG GCCGTTCCTA TCGGCCCCTC ACCCTCAAAC
CAGTCCTATA TCGTCATAGA CAGGATTCTT GAGGCAATCC GCAAGACCGG CGCCGATGCG
GTGCATCCTG GCTACGGCTT CCTTTCTGAA AATTCCGCCT TCGCCGAGGC TCTGGAGAAA
GAGGGCGTAA CCTTCATCGG TCCGCCAGTC AGGGCCATCG AAGCGATGGG CGACAAGATC
ACCTCGAAGA AGCTTGCCGC CGAAGCAGGC GTTTCCACCG TTCCCGGCCA TATGGGGCTG
ATCGGGGATG CGGACGAGGC CGCACGCATC GCCGCTTCGA TCGGCTTTCC GGTGATGATA
AAGGCGTCTG CCGGCGGCGG CGGCAAGGGA ATGCGGATCG CCTGGACCGA GGACGAGGCA
CGCGAGGGCT TTCAGTCATC GAAGAACGAG GCGAAGAGTT CCTTCGGCGA CGACCGCATC
TTCATCGAGA AATTCGTGAC CGAGCCCCGC CACATCGAGA TCCAGGTGCT CGGCGACAAG
CATGGCAACA TCGTCTATCT GGGCGAGCGC GAATGCTCGA TCCAGCGGCG GAACCAGAAG
GTTATCGAGG AGGCGCCCTC GCCCTTCCTC GACGAGAAGA CGCGCCGCGC CATGGGCGAG
CAGGCGGTGG CGCTGGCAAA GGCCGTCGCC TATTTTTCGG CCGGCACGGT CGAGTTCATC
GTCGACGCCC GCGGAAACTT CTATTTTCTC GAGATGAATA CCCGGCTGCA GGTCGAGCAT
CCGGTGACGG AACTCGTCAC CGGCCTCGAT CTCGTCGAGC AGATGATCCG CGTCGCGGCG
GGGGAGAAAC TCGCCTTTGC ACAGAAGGAT GTGAAGCTCG ACGGATGGGC GATCGAAAGC
CGGCTCTATG CGGAAGACCC CTACCGCAAT TTTCTTCCTT CGATCGGCCG GCTGAGCCGC
TACCGCCCGC CGGAGGAAGG CCCGCGGGCG GACGGTACCG TCATTCGCAA CGATACCGGC
GTCTTGGAAG GCGGCGAGAT CTCGATGTAT TACGATCCGA TGATCGCCAA GCTTTGCACC
TGGGGTCCGG ACCGGGCGAC CGCCGTCCGG GCGATGGCGG ATGCGCTCGA CGCGTTCGAG
ATCGAAGGCG TCGGCCACAA CCTGCCCTTC CTTGCAGCCG TCATGCAGCA GGATCGTTTC
CGCGAGGGAC GGCTGACCAC GGCCTATATC GCCGAGGAGT TTGCCGGCGG TTTTCAGGGC
GTGGTGCCGG ACGACACAGC GGCGCGCAAA CTCGCCGCCA TCGCGGTGAG CGTCAATCAG
ACGCTGCAGG AGCGCGCCAG CCGCATCTCG GGCACCATCG GCAACCATCG CCGGGTCATC
GGTCACGAAT GGGTGGCAAG CCTCGACGGG CACGAAATTC AGGTCACATG CGAAGCTTCC
GCCGACGGCA CCTATGTACG CTTTGCCGAC GGGACATCTG TCTCCGTCGC AACTGACTGG
ACCCCCGGTC GCACCCGTGC CGCTTTCAAC ATAGAAAATC AGCCGATGAG CGTGAAGGTC
GAGCTTGCCG GCACCGGAAT AAGGCTGCGC TGGCGCGGGA TCGACGTCGT TGCACGGGTC
AGAAGCCCAC ACATTGCCGA ACTCGCCCGG CTGATGCCGA AGAAGCTGCC GCCGGACACG
TCGAAGATGC TGCTCTGCCC GATGCCGGGG GTAGTGACGT CGATCACGGT GAAGGCCGGG
GAGACAGTGG AGGCCGGACA GGCGATCGCC GTCGTCGAGG CAATGAAGAT GGAGAATATA
TTGAGGGCGG AAAGACGCTC GATCGTGAAG CGCGTGGCGA TCGAAGCCGG GGCGAGCCTG
GCCGTGGACG AGTTGATCAT GGAGTTCGAG TGA
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| Protein sequence | MENMFKKILI ANRGEIACRV IRTAKSLDIP TVAVYSDADR DAMHVRMADE AVPIGPSPSN
QSYIVIDRIL EAIRKTGADA VHPGYGFLSE NSAFAEALEK EGVTFIGPPV RAIEAMGDKI
TSKKLAAEAG VSTVPGHMGL IGDADEAARI AASIGFPVMI KASAGGGGKG MRIAWTEDEA
REGFQSSKNE AKSSFGDDRI FIEKFVTEPR HIEIQVLGDK HGNIVYLGER ECSIQRRNQK
VIEEAPSPFL DEKTRRAMGE QAVALAKAVA YFSAGTVEFI VDARGNFYFL EMNTRLQVEH
PVTELVTGLD LVEQMIRVAA GEKLAFAQKD VKLDGWAIES RLYAEDPYRN FLPSIGRLSR
YRPPEEGPRA DGTVIRNDTG VLEGGEISMY YDPMIAKLCT WGPDRATAVR AMADALDAFE
IEGVGHNLPF LAAVMQQDRF REGRLTTAYI AEEFAGGFQG VVPDDTAARK LAAIAVSVNQ
TLQERASRIS GTIGNHRRVI GHEWVASLDG HEIQVTCEAS ADGTYVRFAD GTSVSVATDW
TPGRTRAAFN IENQPMSVKV ELAGTGIRLR WRGIDVVARV RSPHIAELAR LMPKKLPPDT
SKMLLCPMPG VVTSITVKAG ETVEAGQAIA VVEAMKMENI LRAERRSIVK RVAIEAGASL
AVDELIMEFE
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