| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30510 |
|---|
| Symbol | |
|---|
| ID | 8388375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3302234 |
|---|
| End bp | 3304231 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644977080 |
|---|
| Product | acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| Protein accession | YP_003134853 |
|---|
| Protein GI | 257057021 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.434229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGT TCGACACCGT GCTGGTCGCC AACCGCGGTG AGATCGCCGT GCGGATCATC
GAGACGTTGC GGCGCCTGGG CATCCGGTCG GTGGCCATTT ACAGCGATGC CGATGCCGAT
GCCCGGCATG TGGTGGAGGC CGACCTCGCG CGGCGGGTGG GACCCGCCGA GGCGGCGCGT
AGTTATCTGT CCATCCCCGA CATCGTCGCC GCCGCGGTGG AGACGGGCGC ACAGGCCGTG
CACCCGGGTT ACGGTTTCCT GGCCGAGAAC GCCGAGTTCG CCAAGGCGTG TGAAGCGGCG
GGACTGGTGT TCATCGGGCC GACGGTGGCG GCCATCGAGG CGATGGGCGA CAAGATCCGG
GCGAAGGAGA CGGTGTCGGC CGCCGGGGTC CCGGTGGTTC CGGGCGTCAA CGATGTGTCC
GATGTGGACT CCATTGTGGC CGCTGCCGAG CGGGTCGGGT ATCCCGTGCT GCTGAAACCG
TCCGCGGGAG GCGGCGGCAA GGGGATGCGG CTGGTGCACA CGCCCGCTGA ACTGCCCGCC
GCCGTGGAAT CGGCGCAGCG GGAGGCGCGT GGCGCGTTCG GTGACGACCG GTTGTTGGTC
GAGCGGTTCG TCGCCGAGCC GAGGCACATC GAGATCCAGG TGCTCGCCGA CACCCACGGC
ACCGTCGTGC ACCTGGGTGA GCGCGAATGC AGTCTGCAAC GCCGCCACCA GAAGATCGTG
GAGGAGGCGC CCTCGGCGGT GCTCGACGCC GAGACCCGCG CTCGCATGGG GAAGGCGGCG
GTGGAGGCGG CCCGTTCGGT CGGTTACGTC GGCGCGGGCA CGGTGGAGTT CATCGTGCCG
GCGTCCGCGC CCGAGGAGTT CTTCTTCCTA GAGATGAACA CCCGCCTCCA GGTGGAGCAT
CCGGTGACCG AACTGGTGAC CGGGCTCGAC CTGGTGGAAT GGCAGCTGCG GATAGCGGCG
GGGGAGCGGC TGACGCTGTC GCAGGAGGAC GTGCGCCTCG ACGGACACGC CGTGGAGGCC
CGGATCTACG CCGAGGACCC GACGCGTGAC TTCATGCCCA CCGGGGGCAC GGTGTTGGGG
TTGCACGAGC CTTCCGGCGC GCACGTGCGA GTGGACTCCG GGCTACGTCG GGGCACCGTG
GTGACCTCGC ACTACGACCC GATGTTGGCG AAGGTGATCG CGTGGGGCCC GGACCGCACT
TCGGCGCTTC GCAGGCTCGA GCGGGCGTTG GCCGACACCG CTGTCCTCGG GGTGCCGACG
AACGTGCCGT TTTTGCGTGC CCTCGTGCGG CACCCCGACG TCGTGGCCGG ACGACTGGAC
ACCGGTCTGG TGGAGCGGGA ACTGCTCACG CTGATCGACG ACACCGTGCC CGAGGAGTTC
TTCGTGGTCG CCGCTCTCGA CCGGTTGTTG GAGCTGTGGC CCACCGGCGC GGTGGTGGAC
CCGTGGGACG TGCCCAACGG TTGGCGGATC GGTGGTAGCG CCGGGATGAC GATGCGCCTG
AGCGCGGGGC ACGCCGAGGC GCTCGTGCGG ATCGAGGGGG AACCCACCGC CGCACGGGTC
ACTGTGGACG GCGGGGAGCC GGTGGTCGCG TCCGTGGCGC GGGACGGGAA CGGGTCCACC
GACCTCGTCG TGCGCCTCGC GGGTGAGTCC CGGGGGTATC GACGGGCGCA GGCGCCCGAC
GGCGCCGTGT GGTACGAGCG GGAGGGACGG GCCGTCGCGG TGAGCGAACG GCCGAATCTG
CTCGCCTCCC ACGCCGAGTC GGTGGAGTCG GGGCCCGTCA CGAGTCCGAT GCCGGGCACC
GTGCTCGTGG TCGAGGTCGA GCCCGGCGAC GTGGTGCGGG CGGGAGAGCC GCTGTTGGTC
GTCGAGGCGA TGAAGATGGA ACACACGATC ACCGCGCCCG TCGACGGTGT CGTGAGCAGA
GTGGATGTCC GTGTCGGCCA ACAGGTCGCG CTGGACGAAC CCCTGGCCCT GGTGACCCCG
GAAGAAGGCG AATCATGA
|
|---|
| Protein sequence | MGMFDTVLVA NRGEIAVRII ETLRRLGIRS VAIYSDADAD ARHVVEADLA RRVGPAEAAR
SYLSIPDIVA AAVETGAQAV HPGYGFLAEN AEFAKACEAA GLVFIGPTVA AIEAMGDKIR
AKETVSAAGV PVVPGVNDVS DVDSIVAAAE RVGYPVLLKP SAGGGGKGMR LVHTPAELPA
AVESAQREAR GAFGDDRLLV ERFVAEPRHI EIQVLADTHG TVVHLGEREC SLQRRHQKIV
EEAPSAVLDA ETRARMGKAA VEAARSVGYV GAGTVEFIVP ASAPEEFFFL EMNTRLQVEH
PVTELVTGLD LVEWQLRIAA GERLTLSQED VRLDGHAVEA RIYAEDPTRD FMPTGGTVLG
LHEPSGAHVR VDSGLRRGTV VTSHYDPMLA KVIAWGPDRT SALRRLERAL ADTAVLGVPT
NVPFLRALVR HPDVVAGRLD TGLVERELLT LIDDTVPEEF FVVAALDRLL ELWPTGAVVD
PWDVPNGWRI GGSAGMTMRL SAGHAEALVR IEGEPTAARV TVDGGEPVVA SVARDGNGST
DLVVRLAGES RGYRRAQAPD GAVWYEREGR AVAVSERPNL LASHAESVES GPVTSPMPGT
VLVVEVEPGD VVRAGEPLLV VEAMKMEHTI TAPVDGVVSR VDVRVGQQVA LDEPLALVTP
EEGES
|
|---|
| |