| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3352 |
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| Symbol | |
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| ID | 3971066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3706278 |
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| End bp | 3708293 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926464 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_533213 |
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| Protein GI | 90424843 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.124303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC GCATTCTGAT CGCCAATCGC GGCGAAATCG CCTGTCGGGT CATCAAAACC
GCCCGCCGCA TGGGTATCGA GACCGTCGCC GTTTATTCGG AGGCCGACCG CGATGCGCTC
CACGTCGAGA TGGCCGATCA TGCCGTCCTG ATCGGGCCGC CGGCCGCCTC CGAGAGCTAT
CTGGTGATGG AGAAGATCAT CGAGGCCTGC CGCAAGACCG GCGCCGAAGC GGTGCATCCC
GGCTACGGCT TCCTGTCCGA GCGCGAGGCA TTCGCAGTGG CGCTGGCTGA CGCCGGCATC
GTCTTCATCG GCCCCAACCG CGGCGCGATC GCCGCGATGG GCGACAAGAT CGAATCCAAG
AAAGCGGCCG CCGCGGCCAA CGTCTCGACC GTGCCGGGCT ATCTCGGCGT CATTGAGGAC
GAAAAGCACG CGGTGAAGAT CGCCGACCAG ATCGGCTATC CGGTGATGAT CAAGGCCTCC
GCCGGCGGCG GCGGCAAGGG CATGCGGATC GCGCATTCGA CCTCCGAGGT CGCCGAAGGT
TTCGGCCTCG CCAAGGCCGA GGCGAAGTCT TCGTTCGGCG ACGACCGGGT GTTCATCGAG
AAATTCATCG TCGATCCGCG CCACATCGAA ATCCAGGTGC TCGGCGACAA GCACGGCAAC
GTCATCTATC TCGGCGAGCG CGAATGCTCG ATCCAGCGCC GCAATCAGAA GGTGATCGAG
GAGGCGCCGT CGCCGCTCTT GGACGAGACC ACGCGGCGCA AGATGGGCGA ACAGGCGGTG
GCCTTGGCCA AGGCGGTGAA TTACGATTCC GCCGGCACCG TGGAATTCGT CGCCGGCCAG
GACAAGAGCT TCTACTTCCT GGAAATGAAT ACCCGGCTGC AGGTCGAGCA TCCGGTCACC
GAAATGGTCA CCGGGATCGA TCTGGTCGAG CAGATGATCC GGGTCGCGGC CGGCGAGAAG
CTGCAGCTGG CGCAGAAGGA CGTGACGCTG ACCGGCTGGG CGGTGGAGTC GCGGGTCTAT
GCCGAGGATC CGTTCCGCAA TTTCCTGCCG TCGATCGGCC GGCTGGTGAA GTATCGCCCG
CCGAAGGAAA GCTCGCACAA CGGCATCACC GTGCGCAACG ATACCGGCGT GCAGGAAGGC
GGCGAGATCG CGATCTACTA CGATCCGATG ATCGCCAAGC TGGTCACCCA CGCGCCGTCG
CGGACGGCCG CGATCGAAGC GCAGGCGCAT GCGCTGGATG CGTTCTACAT CGACGGCATC
CGCCACAACA TTCCGTTCCT GTCGGCATTG ATGACGCATC CGCGCTGGCG CGAGGGCAAT
CTGTCCACCG GCTTCATCGC CGAGGAATTC CCCAAGGGCT TCACCGCGCG GGTGCCGGAG
GGCGAAATCG CCCGCCGCAT CGCCGCGGTG GGAGCGGCGA TCGACCGCGT GATCGGCGAG
CGCAAGCGCA AGATCTCCGG CCAGATGATC GGCCGCGCGG TGATCCGCGA ACGCCGCCGC
TGCGTGTGGC TGGAGCGCAG CGAGGTGCCG CTCGACGTCA CCCGCGAAGG CGAGGGCTTC
GTGGTTCGCT TCGTCGGCGC CGACGGCACC ATGGGGCAGC CGCATCTGTT GCTGTCGCCG
TGGATCCCCG GCGATCCGGT GTGGCACGGC ACCATCGACG GGCGGCCCGT CGCGGTGCAG
GTGCGGCCGA TCCCGAACGG GGTGCGGCTG GCGCATCACG GCTATGAGGT CGCGGTCAAC
GTCTTCACCG AACGCGAGGC GTCGGCGGCG CGCTGGATGC TGGTCGGCAA CAAGGCCGAC
ACCGGCAAGA AGGTGCTGTG CCCGATGCCC GGACTGGTGG TGTCGATCGC GGTCGCCGAA
GGCCAGGAGG TCAAGGCCGG CGAAACGCTG GCGATCGTCG AGGCGATGAA GATGCAGAAC
GTGCTGCGTG CCGAACGCGA CGGCGTGGTG AAGAAGATCC ACGCCGCACC GGGGGCGACG
TTGGCGGTCG ACGCCACCAT CCTCGAGTTC GCCTAA
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| Protein sequence | MFKRILIANR GEIACRVIKT ARRMGIETVA VYSEADRDAL HVEMADHAVL IGPPAASESY
LVMEKIIEAC RKTGAEAVHP GYGFLSEREA FAVALADAGI VFIGPNRGAI AAMGDKIESK
KAAAAANVST VPGYLGVIED EKHAVKIADQ IGYPVMIKAS AGGGGKGMRI AHSTSEVAEG
FGLAKAEAKS SFGDDRVFIE KFIVDPRHIE IQVLGDKHGN VIYLGERECS IQRRNQKVIE
EAPSPLLDET TRRKMGEQAV ALAKAVNYDS AGTVEFVAGQ DKSFYFLEMN TRLQVEHPVT
EMVTGIDLVE QMIRVAAGEK LQLAQKDVTL TGWAVESRVY AEDPFRNFLP SIGRLVKYRP
PKESSHNGIT VRNDTGVQEG GEIAIYYDPM IAKLVTHAPS RTAAIEAQAH ALDAFYIDGI
RHNIPFLSAL MTHPRWREGN LSTGFIAEEF PKGFTARVPE GEIARRIAAV GAAIDRVIGE
RKRKISGQMI GRAVIRERRR CVWLERSEVP LDVTREGEGF VVRFVGADGT MGQPHLLLSP
WIPGDPVWHG TIDGRPVAVQ VRPIPNGVRL AHHGYEVAVN VFTEREASAA RWMLVGNKAD
TGKKVLCPMP GLVVSIAVAE GQEVKAGETL AIVEAMKMQN VLRAERDGVV KKIHAAPGAT
LAVDATILEF A
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