More than 300 homologs were found in PanDaTox collection
for query gene RPC_3352 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  60.36 
 
 		 667 aa  754    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  65.29 
 
 		 673 aa  845    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.776074 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  55.61 
 
 		 652 aa  683    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  60.8 
 
 		 667 aa  783    Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  59.32 
 
 		 669 aa  768    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  74 
 
 		 667 aa  914    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  62.99 
 
 		 666 aa  805    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal  1 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  51.93 
 
 		 696 aa  655    Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  54.21 
 
 		 682 aa  690    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal  1 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  55.41 
 
 		 667 aa  692    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  55.12 
 
 		 675 aa  689    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.848501 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  67.16 
 
 		 669 aa  865    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.0599498 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  81.37 
 
 		 671 aa  1087    Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  0.124901 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  68.45 
 
 		 668 aa  864    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal  1 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  63.28 
 
 		 695 aa  806    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  57.42 
 
 		 678 aa  716    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  53.55 
 
 		 669 aa  671    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.0501395 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  59.77 
 
 		 669 aa  773    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  55.47 
 
 		 682 aa  692    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal  1 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  90.31 
 
 		 671 aa  1228    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  60.51 
 
 		 667 aa  778    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  57.54 
 
 		 662 aa  732    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  91.8 
 
 		 671 aa  1226    Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.60166 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  59.79 
 
 		 660 aa  738    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  57.39 
 
 		 673 aa  724    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  58.98 
 
 		 681 aa  757    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal  1 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  73.21 
 
 		 667 aa  933    Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  59.62 
 
 		 680 aa  763    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal  1 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  54.85 
 
 		 684 aa  688    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  60.6 
 
 		 666 aa  771    Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  55.8 
 
 		 682 aa  688    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  54.07 
 
 		 682 aa  688    Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  57.29 
 
 		 678 aa  719    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  100 
 
 		 671 aa  1363    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal  1 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  54.84 
 
 		 682 aa  699    Polaromonas sp. JS666  Bacteria  normal  1  normal  0.283926 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  55.17 
 
 		 682 aa  678    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  61.94 
 
 		 666 aa  795    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  72.47 
 
 		 667 aa  920    Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.390977 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  74.18 
 
 		 671 aa  950    Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.519853 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  55.81 
 
 		 682 aa  700    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  92.25 
 
 		 691 aa  1217    Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  84.65 
 
 		 671 aa  1115    Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  55.12 
 
 		 691 aa  704    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  84.95 
 
 		 671 aa  1130    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  68.15 
 
 		 668 aa  862    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  63.93 
 
 		 671 aa  840    Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.187116 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  59.18 
 
 		 676 aa  774    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  56.41 
 
 		 668 aa  700    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal  1 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  60.27 
 
 		 670 aa  777    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  72.62 
 
 		 684 aa  922    Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  60.44 
 
 		 667 aa  771    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  63 
 
 		 670 aa  817    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  58.32 
 
 		 662 aa  731    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  59.62 
 
 		 685 aa  780    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal  1 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  74.22 
 
 		 675 aa  979    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  72.86 
 
 		 673 aa  946    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  44.61 
 
 		 656 aa  553  1e-156  Ehrlichia canis str. Jake  Bacteria  normal  1  n/a   
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  44.35 
 
 		 655 aa  555  1e-156  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  42.79 
 
 		 691 aa  522  1e-146  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  41.94 
 
 		 661 aa  506  9.999999999999999e-143  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  41.94 
 
 		 661 aa  507  9.999999999999999e-143  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.5 
 
 		 666 aa  499  1e-140  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  55.61 
 
 		 450 aa  501  1e-140  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  44.28 
 
 		 665 aa  501  1e-140  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.434229 
 
 
-
 
NC_009485  BBta_4048  putative acyl-CoA carboxylase biotin-carrying subunit  44.86 
 
 		 670 aa  495  1e-139  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.139435  normal  0.287749 
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  54.06 
 
 		 480 aa  493  9.999999999999999e-139  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  44.96 
 
 		 643 aa  494  9.999999999999999e-139  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  44.78 
 
 		 662 aa  490  1e-137  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.41 
 
 		 668 aa  491  1e-137  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  42.27 
 
 		 681 aa  487  1e-136  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  43.47 
 
 		 661 aa  488  1e-136  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal  1 
 
 
-
 
NC_007958  RPD_0350  carbamoyl-phosphate synthase L chain, ATP-binding  45.1 
 
 		 679 aa  486  1e-136  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  hitchhiker  0.000448558 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  43.34 
 
 		 662 aa  484  1e-135  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  54 
 
 		 450 aa  483  1e-135  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007958  RPD_2535  carbamoyl-phosphate synthase L chain, ATP-binding  45.1 
 
 		 671 aa  484  1e-135  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  43.63 
 
 		 712 aa  479  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR0018  biotin carboxylase  44.97 
 
 		 673 aa  479  1e-134  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B2811  acetyl-CoA carboxylase biotin carboxylase subunit  52.21 
 
 		 445 aa  480  1e-134  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000387379 
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  44.97 
 
 		 673 aa  482  1e-134  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_1803  acetyl-CoA carboxylase biotin carboxylase subunit  51.99 
 
 		 445 aa  479  1e-134  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.220445  n/a   
 
 
-
 
NC_007778  RPB_2933  carbamoyl-phosphate synthase L chain, ATP-binding  45.01 
 
 		 671 aa  480  1e-134  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  59.21 
 
 		 667 aa  482  1e-134  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2512  acetyl-CoA carboxylase biotin carboxylase subunit  52.21 
 
 		 445 aa  479  1e-134  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  42.37 
 
 		 652 aa  477  1e-133  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  52.91 
 
 		 446 aa  478  1e-133  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_003909  BCE_2549  acetyl-CoA carboxylase biotin carboxylase subunit  51.99 
 
 		 445 aa  477  1e-133  Bacillus cereus ATCC 10987  Bacteria  normal  0.569347  n/a   
 
 
-
 
NC_005945  BAS2370  acetyl-CoA carboxylase biotin carboxylase subunit  51.77 
 
 		 445 aa  477  1e-133  Bacillus anthracis str. Sterne  Bacteria  normal  0.17472  n/a   
 
 
-
 
NC_005957  BT9727_2328  acetyl-CoA carboxylase biotin carboxylase subunit  51.77 
 
 		 445 aa  476  1e-133  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.611182  n/a   
 
 
-
 
NC_011138  MADE_02415  methylcrotonyl-CoA carboxylase, alpha subunit  42.39 
 
 		 666 aa  477  1e-133  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK2286  acetyl-CoA carboxylase biotin carboxylase subunit  51.77 
 
 		 445 aa  476  1e-133  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_1604  carbamoyl-phosphate synthetase large chain  56.4 
 
 		 668 aa  477  1e-133  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0456964  normal  0.316567 
 
 
-
 
NC_007530  GBAA_2548  acetyl-CoA carboxylase biotin carboxylase subunit  51.77 
 
 		 445 aa  477  1e-133  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A2604  acetyl-CoA carboxylase biotin carboxylase subunit  51.99 
 
 		 445 aa  478  1e-133  Bacillus cereus AH187  Bacteria  normal  0.189257  n/a   
 
 
-
 
NC_011773  BCAH820_2561  acetyl-CoA carboxylase biotin carboxylase subunit  51.55 
 
 		 445 aa  474  1e-132  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.5537800000000004e-18 
 
 
-
 
NC_006368  lpp1792  hypothetical protein  39.91 
 
 		 654 aa  474  1e-132  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  52.02 
 
 		 448 aa  473  1e-132  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_011694  PHATRDRAFT_51245  carboxylase propionyl-coa carboxylase  41.9 
 
 		 664 aa  472  1e-132  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1359  3-methylcrotonyl-CoA carboxylase alpha subunit  43.63 
 
 		 673 aa  472  1e-132  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.812437 
 
 
-
 
NC_010814  Glov_1598  acetyl-CoA carboxylase, biotin carboxylase  52.47 
 
 		 446 aa  473  1e-132  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000269909  n/a   
 
 
-
 
NC_011004  Rpal_2809  Carbamoyl-phosphate synthase L chain ATP-binding  43.04 
 
 		 670 aa  474  1e-132  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.978814  n/a   
 
 
-
 
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