Gene Amir_6229 details

Gene Information

• Locus tag: Amir_6229
• ID: 8330440
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 7305127
• End bp: 7307058
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644946661
• Product: Carbamoyl-phosphate synthase L chain ATP- binding
• Protein accession: YP_003103880
• Protein GI: 256380220
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit
• TIGRFAM ID: [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGTGT TCGACACCGT CCTGGTCGCC AACCGAGGCG AGATCGCCGT CCGGGTCGTC 
CGGGCGCTGC GCCGCGCGGG CATCCGGTCC GTCGCGGTGT TCAGCGACGC CGACGCGGAC 
GCCCTGCACG TGCGGCTCGC CGACGCCGCC GTGCGCATCG GGCCCGCCGC CGCCCGCGAC 
AGCTACCTCG ACGCGGGCCG GATCGTCGCC GCCGCGCTGG AGACCGGCGC GCGGGCCGTC 
CACCCCGGCT ACGGGTTCCT CGCCGAGAAC GCCGGGTTCG CCCGCGCCTG CGCCGAGGCC 
GGCCTGGTGT TCATCGGGCC GCCCGTGCGG GCCATCGAGG TGATGGGCGA CAAGATCCAG 
GCCAAGCTCA CCGCCGCGGC CGCCGGGGTG CCGGTGGTGC CGGGGCGCGC CGAACCCGGC 
ATGGGGGACG ACGAGCTGGT CGCCGCCGCC ACCGAGATCG GGTTCCCGGT GCTGGTCAAG 
CCGTCCGCCG GGGGTGGCGG CAAGGGGATG CGGCTGGTGC GCGAGGCCGC CGGGCTGCGC 
GAGGCCGTCG AGTCCGCCCG GCGGGAGGCG CGCGCGTCCT TCGGGGACGA CGCGCTGCTC 
GTGGAGCGGT ACGTGTCCGA CCCCCGGCAC ATCGAGATCC AGGTGCTCGC CGACGCGCAC 
GGCACGACCG TGCACCTCGG CGAGCGCGAG TGCAGCCTCC AGCGGCGGCA CCAGAAGGTC 
ATCGAGGAGG CGCCCTCCCC GCTGCTCGAC GCGGACGCGC GGGAGGCCAT GGGGCGCTCG 
GCCGTGCTGG CCGCCGAGTC GGTCGGCTAC GTCGGCGCGG GCACCGTCGA GTTCATCGTG 
GACGGCACGA CCGGCGAGCA CTTCTTCCTG GAGATGAACA CCCGGCTCCA GGTCGAGCAC 
CCGGTCACCG AGCTGGTCAC CGGCGTCGAC CTGGTCGAGC AGCAGCTGCG CGTGGCCGCC 
GGGGAACCGC TCGGGTTCAC CTCCGTCGAG CTGCGCGGGC ACGCCGTGGA GGCGCGGGTG 
TACGCCGAGG ACCCGGCGCG CGGGTTCCTG CCCACCGGCG GGCGGGTGCT GCTGCTGCGC 
GAGCCCGACG AGGTCCGGGT GGACTCGGCG CTGCGCGAGG GCCTGGTCGT CGGCAGCGAC 
TACGACCCCA TGCTGGCCAA GGTGATCGCG CACGGCGCCA CCCGCGCCGA GGCGCTGCGC 
AGGCTCGACG CCGCGCTGTC GCGCACCGCC GTGCTCGGGG TGACCACGAA CGTGCCGTTC 
CTGCGGGCGC TGCTGGCCCA CCCGGACGTG CGCGCCGGGC GACTGGACAC CGGGCTGGTG 
GAGCGCTCGC TCGACGCGCT GGTGCCCGGC GGGACGCCGG ACGACGTGCT CGTCGCGGCG 
GGCTGCGACC GGTTCCTCGC GCTGGGCGGC GCCGACCCGT GGGAGCGGCT CACCGGCTGG 
CGGGTCGGCG AGCGCGCCTG GGCGCGGTGG GTGCTCGACG GCGCCGAGGT GCGGGTGCGC 
GGCGTCGCGC CCGACGTGGA GGTGCGCGTC GGCGACGCCG ACCCGGTGCG GGTGACCGCG 
CGGCGCGAGG GCGACGAGCT GGTCGTCGGC GCGCGCCGGT ACGCGGTGGC CCGCGACGGG 
GACGCGCTGT GGCTCGGCCG CGACGGCGGG GCCTGGCAGG TCGTGGAGAC GGCCCCGGAC 
GTGGCCGCCG CGCGCGGGGC CTCGTCCGGC GGACCGGTCA CCAGCCCCAT GCCGGGGACG 
GTGCTGCTGG TGCGCGCCGC CGAGGGCGAG GCCGTCGTCG CCGGGCAGGC GCTGTTCGTG 
GTCGAGGCGA TGAAGATGGA GCACACCGTC ACCGCGCCGG TCGACGGGGT GCTCACCGGG 
GTACGGGTCC GGCCCGGCGA CCAGGTCGCG CTGGACGAGC AGTTGGCCGC AGTACTGCCA 
CCCGAGGAGT GA 

 

Protein sequence

MRVFDTVLVA NRGEIAVRVV RALRRAGIRS VAVFSDADAD ALHVRLADAA VRIGPAAARD 
SYLDAGRIVA AALETGARAV HPGYGFLAEN AGFARACAEA GLVFIGPPVR AIEVMGDKIQ 
AKLTAAAAGV PVVPGRAEPG MGDDELVAAA TEIGFPVLVK PSAGGGGKGM RLVREAAGLR 
EAVESARREA RASFGDDALL VERYVSDPRH IEIQVLADAH GTTVHLGERE CSLQRRHQKV 
IEEAPSPLLD ADAREAMGRS AVLAAESVGY VGAGTVEFIV DGTTGEHFFL EMNTRLQVEH 
PVTELVTGVD LVEQQLRVAA GEPLGFTSVE LRGHAVEARV YAEDPARGFL PTGGRVLLLR 
EPDEVRVDSA LREGLVVGSD YDPMLAKVIA HGATRAEALR RLDAALSRTA VLGVTTNVPF 
LRALLAHPDV RAGRLDTGLV ERSLDALVPG GTPDDVLVAA GCDRFLALGG ADPWERLTGW 
RVGERAWARW VLDGAEVRVR GVAPDVEVRV GDADPVRVTA RREGDELVVG ARRYAVARDG 
DALWLGRDGG AWQVVETAPD VAAARGASSG GPVTSPMPGT VLLVRAAEGE AVVAGQALFV 
VEAMKMEHTV TAPVDGVLTG VRVRPGDQVA LDEQLAAVLP PEE