More than 300 homologs were found in PanDaTox collection
for query gene Veis_3403 on replicon NC_008786
Organism: Verminephrobacter eiseniae EF01-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  55.07 
 
 
667 aa  682    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  53.8 
 
 
670 aa  681    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  53.94 
 
 
668 aa  657    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  56.1 
 
 
685 aa  734    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  53.79 
 
 
667 aa  682    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  55.02 
 
 
666 aa  690    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  55.2 
 
 
681 aa  709    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  82.26 
 
 
682 aa  1140    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  53.8 
 
 
667 aa  666    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  55.75 
 
 
673 aa  697    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  56.06 
 
 
684 aa  674    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  75.77 
 
 
682 aa  1043    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  65.15 
 
 
662 aa  863    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  55.28 
 
 
666 aa  714    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  65.07 
 
 
678 aa  866    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  65.45 
 
 
667 aa  856    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  53.26 
 
 
667 aa  682    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  54.37 
 
 
660 aa  663    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  52.69 
 
 
671 aa  652    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  55.2 
 
 
695 aa  707    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  55.28 
 
 
666 aa  708    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  70.38 
 
 
675 aa  961    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  53.43 
 
 
671 aa  657    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  53.1 
 
 
669 aa  656    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  54.59 
 
 
675 aa  683    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  56.45 
 
 
662 aa  725    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  57.06 
 
 
673 aa  699    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  54.31 
 
 
671 aa  665    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  82.4 
 
 
682 aa  1143    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  54.06 
 
 
673 aa  656    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  54.77 
 
 
680 aa  701    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  73.79 
 
 
684 aa  1023    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  56.33 
 
 
671 aa  729    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  100 
 
 
696 aa  1420    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  51.93 
 
 
671 aa  654    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  75.48 
 
 
682 aa  1048    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  56.41 
 
 
671 aa  692    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  77.27 
 
 
682 aa  1063    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  56.79 
 
 
669 aa  710    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  53.39 
 
 
669 aa  658    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  51.68 
 
 
691 aa  644    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  54.88 
 
 
671 aa  667    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  53.35 
 
 
667 aa  676    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  78.59 
 
 
682 aa  1090    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  54.36 
 
 
676 aa  706    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  53.21 
 
 
668 aa  657    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  82.4 
 
 
682 aa  1140    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  72.46 
 
 
691 aa  1004    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  54.66 
 
 
670 aa  673    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  55.67 
 
 
667 aa  668    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  51.54 
 
 
652 aa  640    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  56.06 
 
 
667 aa  676    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  53.71 
 
 
671 aa  657    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  54.44 
 
 
668 aa  644    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  64.77 
 
 
678 aa  861    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  49.71 
 
 
669 aa  615  1e-175  Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  44.69 
 
 
655 aa  555  1e-157  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  42.86 
 
 
656 aa  545  1e-154  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  42.39 
 
 
691 aa  526  1e-148  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  45.7 
 
 
667 aa  517  1.0000000000000001e-145  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  54.19 
 
 
499 aa  508  9.999999999999999e-143  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  41.48 
 
 
665 aa  504  1e-141  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  44.49 
 
 
661 aa  503  1e-141  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  53.74 
 
 
498 aa  502  1e-141  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5035  carbamoyl-phosphate synthase L chain ATP-binding  45.78 
 
 
665 aa  495  1e-139  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.70526  normal 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  53.96 
 
 
450 aa  498  1e-139  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  44.2 
 
 
661 aa  498  1e-139  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_008825  Mpe_A3356  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.89 
 
 
672 aa  493  9.999999999999999e-139  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.782884 
 
 
-
 
NC_010676  Bphyt_4689  Carbamoyl-phosphate synthase L chain ATP-binding  43.7 
 
 
692 aa  494  9.999999999999999e-139  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4157  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.69 
 
 
663 aa  492  9.999999999999999e-139  Polaromonas sp. JS666  Bacteria  normal  0.825758  normal 
 
 
-
 
NC_008543  Bcen2424_5237  carbamoyl-phosphate synthase L chain, ATP-binding  45.78 
 
 
665 aa  491  1e-137  Burkholderia cenocepacia HI2424  Bacteria  normal  0.578975  normal  0.758885 
 
 
-
 
NC_010552  BamMC406_5118  carbamoyl-phosphate synthase L chain ATP-binding  46.45 
 
 
666 aa  491  1e-137  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  44.54 
 
 
662 aa  491  1e-137  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  43.51 
 
 
668 aa  489  1e-137  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3130  carbamoyl-phosphate synthase L chain, ATP-binding  45.78 
 
 
665 aa  491  1e-137  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4585  carbamoyl-phosphate synthase L chain, ATP-binding  46.37 
 
 
666 aa  492  1e-137  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.747689 
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  42.17 
 
 
681 aa  487  1e-136  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.43 
 
 
674 aa  486  1e-136  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  53.3 
 
 
493 aa  486  1e-136  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  41.65 
 
 
653 aa  486  1e-136  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  46.01 
 
 
662 aa  487  1e-136  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_010086  Bmul_3469  carbamoyl-phosphate synthase L chain ATP-binding  44.25 
 
 
670 aa  484  1e-135  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  45.63 
 
 
675 aa  484  1e-135  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  53.63 
 
 
450 aa  484  1e-135  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2694  carbamoyl-phosphate synthase L chain, ATP-binding  43.38 
 
 
661 aa  485  1e-135  Pseudomonas mendocina ymp  Bacteria  normal  0.250479  normal  0.322946 
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  42.26 
 
 
700 aa  479  1e-134  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0311  3-methylcrotonoyl-CoA carboxylase, alpha subunit  42.06 
 
 
706 aa  481  1e-134  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0426  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.2 
 
 
665 aa  481  1e-134  Burkholderia sp. 383  Bacteria  normal  0.967801  normal 
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  43.44 
 
 
643 aa  481  1e-134  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000380  methylcrotonyl-CoA carboxylase biotin-containing subunit  40.44 
 
 
686 aa  480  1e-134  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  52.41 
 
 
689 aa  480  1e-134  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  51.44 
 
 
446 aa  481  1e-134  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_008261  CPF_1330  biotin carboxylase  50.65 
 
 
450 aa  479  1e-134  Clostridium perfringens ATCC 13124  Bacteria  normal  0.110038  n/a   
 
 
-
 
NC_008262  CPR_1142  biotin carboxylase  50.87 
 
 
450 aa  479  1e-134  Clostridium perfringens SM101  Bacteria  normal  0.123284  n/a   
 
 
-
 
NC_008321  Shewmr4_2325  3-methylcrotonoyl-CoA carboxylase, alpha subunit  41.32 
 
 
679 aa  479  1e-134  Shewanella sp. MR-4  Bacteria  normal  normal  0.676879 
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  39.22 
 
 
661 aa  477  1e-133  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1792  hypothetical protein  41.09 
 
 
654 aa  477  1e-133  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  39.22 
 
 
661 aa  478  1e-133  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  52.55 
 
 
448 aa  479  1e-133  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_008322  Shewmr7_2397  3-methylcrotonoyl-CoA carboxylase, alpha subunit  41.03 
 
 
679 aa  477  1e-133  Shewanella sp. MR-7  Bacteria  normal  0.63603  normal  0.616301 
 
 
-
 
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