| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1359 |
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| Symbol | |
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| ID | 4603611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1647559 |
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| End bp | 1649580 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780709 |
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| Product | 3-methylcrotonyl-CoA carboxylase alpha subunit |
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| Protein accession | YP_927236 |
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| Protein GI | 119774496 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit
[TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.812437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACA AACTCTTAAT TGCCAATCGC GGCGAAATTG CCTGCCGCGT TATCCGCACC
GCCCGCGACA TGGGCATTAA AACCGTGGCC GTCTACTCAG ATGCCGACCG CGACGCCCGC
CATGTGGCGC TGGCAGATGA GTCTTTTTAT CTGGGTGAAA GCGCCCCGGC GAGCTCTTAT
CTTCGCGGTG AGCTGATTAT CGATATCGCC AAAAAATGCG GCGCCGAGGC CATTCACCCC
GGTTACGGCT TTTTGTCGGA AAACGCTGCT TTTGCCCGCG CCTGTGAGGC AAGCGGCATC
GCCTTTGTGG GCCCGGGCTC AGACGCCATC GACGCCATGG GCAGCAAAAG CGCCGCCAAG
CTGATTATGG AAAAAGCCGG TGTGCCCCTG GTACCCGGTT ACCACGGCGA CGACCAAAGT
GATGCCACCC TGCTTGCTGA AGCCAAAAAA ATTGGTTATC CCCTGCTTAT CAAGGCCGCC
TACGGTGGTG GCGGCAAGGG CATGCGTATT GTCGAGAGTG AGAGCGAGCT TAAAGCGGCC
ATCGACTCGG CCCGCCGCGA GGCCGCCTCA AGCTTTGGCA ACGATAAACT CTTGATGGAG
CGTTATCTGC GTCAGCCGCG CCACGTTGAG GTGCAGGTGT TTGCAGACTC ACAGGGCAAC
TGCGTGTATC TGTCTGACCG CGACTGCTCT ATTCAGCGCC GCCACCAAAA GGTGGTGGAA
GAAGCCCCTG CCCCGGGCCT GCCGGACAGC CTGCGCAAGC AAATGGGTGA AGCTGCCGTT
GCCGCTGCCA AGGCCATCGA CTATCGCGGC GCCGGTACCG TGGAGTTCCT GCTTGACGTC
GATATGAGCT TCTTCTTTAT GGAGATGAAC ACCCGTCTGC AGGTAGAGCA CCCGGTGACC
GAAATGGTCA CTGGTCAGGA TTTGGTGAAA TGGCAGCTGC TGGTTGCTGC GGGTGCCCAG
CTGCCACTGG AGCAGCACGA AATCCAAATC CATGGCCACG CCTTTGAGGT GCGGATTTAC
GCCGAAGATC CCAATAACGA GTTTTTGCCT GCCAGTGGCA AGCTCACCTT TTTGCGTGAG
CCAGAGCCAA GCCGTCATGT GCGCATCGAC TCTGGCGTGC GTGAAAATGA TGTGATTTCA
AACTACTACG ACCCCATGAT TGCCAAGCTG ATTGTGTGGG ACGAGTCGCG CCCCCGCGCG
CTGGCACGCC TTACCCGCGC CCTTGGCGAT TACCGTGTGG GCGGACTTAA ACACAATATC
GAGTTTCTCT CCAACATCGC CGAGCATCCG GCGTTTGCAC AGGCGAACTT TTCCACCGAC
TTTATCGGCC GCTATGGTGA TGCGCTGATT GGCGACAGTC GCGACGAAGC AGACACCGCC
TTTGTGCTGG CCGTGCTCAC TCAGCTGCGT TTACGTGAGG CTGTGTCTCA GGACGTGGCT
GGACACGACC CCTTCAGCCC CTGGTCGAGC CTGAAAGGCT TTCGCCTAAG CAGCCCAAGA
CGCCACAGCG TAACCCTGCT GGATGACGCT CACCAAAGCC GCAGCGCAGA GCTCACCGAG
TCAAACGGCC GCTATCAGCT GTGCCTTAAC GACAAGCTGA TTGAGCTAAG CGGCAGCATT
GAAGACAGCG AGCTTAAGTG CGAAATCAAC GGCCACAAAA TGAAGGTGAC AGTATCGCTG
GAAGACGGCG GCCTCACCGT GTTCCTCTCA AGCGGCAGTT ACCACTTCCG TGAAGTGCTC
GGCCAGGTGC TGGAAGAAAC CGCGAGCTCA GAAGATAAAC TCAAGGCACC GATGAACGGC
ACTGTGGTGA CCCATCTGGT GGCTGCGGGC GATAAAGTCA GCGCCGGTCA GGGTTTGCTC
GTGATGGAAG CCATGAAGAT GGAATACACC ATAGAAGCGC CCTTTGATGG GGTGGTGAGC
GAGTTCTTCT TTGCCCCCGG CGAGCTGGTG TCGGACGGTA CCTTGCTGCT GGCGCTGGAG
ATGGCCGATG CTGCAGCCGA CAGTAAAGAA ACGGAGGCCT GA
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| Protein sequence | MFNKLLIANR GEIACRVIRT ARDMGIKTVA VYSDADRDAR HVALADESFY LGESAPASSY
LRGELIIDIA KKCGAEAIHP GYGFLSENAA FARACEASGI AFVGPGSDAI DAMGSKSAAK
LIMEKAGVPL VPGYHGDDQS DATLLAEAKK IGYPLLIKAA YGGGGKGMRI VESESELKAA
IDSARREAAS SFGNDKLLME RYLRQPRHVE VQVFADSQGN CVYLSDRDCS IQRRHQKVVE
EAPAPGLPDS LRKQMGEAAV AAAKAIDYRG AGTVEFLLDV DMSFFFMEMN TRLQVEHPVT
EMVTGQDLVK WQLLVAAGAQ LPLEQHEIQI HGHAFEVRIY AEDPNNEFLP ASGKLTFLRE
PEPSRHVRID SGVRENDVIS NYYDPMIAKL IVWDESRPRA LARLTRALGD YRVGGLKHNI
EFLSNIAEHP AFAQANFSTD FIGRYGDALI GDSRDEADTA FVLAVLTQLR LREAVSQDVA
GHDPFSPWSS LKGFRLSSPR RHSVTLLDDA HQSRSAELTE SNGRYQLCLN DKLIELSGSI
EDSELKCEIN GHKMKVTVSL EDGGLTVFLS SGSYHFREVL GQVLEETASS EDKLKAPMNG
TVVTHLVAAG DKVSAGQGLL VMEAMKMEYT IEAPFDGVVS EFFFAPGELV SDGTLLLALE
MADAAADSKE TEA
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