| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4048 |
|---|
| Symbol | |
|---|
| ID | 5153099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4246804 |
|---|
| End bp | 4248816 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640558881 |
|---|
| Product | putative acyl-CoA carboxylase biotin-carrying subunit |
|---|
| Protein accession | YP_001240020 |
|---|
| Protein GI | 148255435 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.139435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.287749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCATGG CCCATCCCGG AATGTATCGT CGTTTTCGCA AGCTCCTGAT CGCCAACCGC
GGCGAGATCG CCGTGCGTGT CATCCGCACT GCGCGGGCCA TGGGATTGAA GACCGTCGCT
GTCTATTCCG AGGCCGACCG CAATGCGCTG CATGTCGCGC TCGCCGATGA AGCCGTGCTG
CTCGGCCCCG CGCGCGCCCG CGATTCCTAC CTCAACATCG AACGGCTGAT CGAGGCCGCC
CGGCAGACCG GCGCCGAGGC GCTGCATCCC GGCTACGGCT TCCTGTCTGA GAGCGCCGAG
TTCGCGCAGG CCTGTCTCGA TGCCGGGCTG GTGTTCGTCG GCCCCACGGC TGCGATGATC
ACCGCGATGG GCTCGAAGTC CGGTTCCAAA TTCCTGATGG AGCAGGCCGG CGTGCCGCTG
GTGCCCGGCT ATCACGGCGA GGCGCAGGAC GAGGCGACGC TCGCCGATGA GGCGGCGCGG
ATCGGCTATC CCGTGCTGAT CAAGGCCTCC GCCGGCGGCG GCGGCCGCGG CATGCGCGTG
GTCCATGCGG CCGGCGATCT CGCCGATGCC GTCACCAGCG CCAAGCGCGA GGCCAAGGCG
GCGTTCGGCG ACGACCGCGT GCTGATCGAG AAGTTCGTCG AGAATCCGCG CCACATCGAG
GTGCAGATCG TCGGCGACAG CCACGGCAAT CTGGTCTCGC TGTTCGAGCG CGAATGCACC
CTGCAGCGCC GCCATCAGAA GGTGATCGAG GAGGCGCCGT CGCCGACGCT GTCGCCGGCC
CAGCGCGAGA CGGTCTGCGC CGCGGCGCGG CGCGCGGCGG GCGCGGTCAA CTATGTCGGC
GCCGGCACCA TCGAGTTCGT CTCCGACGGC CGCGACGTGT TCTTCATCGA GATGAACACG
CGCCTGCAGG TCGAGCATCC CGTCACCGAG CTGATCACCG GCGTCGACCT GGTCGAATGG
CAACTGCGTG TCGCCTTCGG CGAACCGCTG CCGCTGACGC AGGACCAGAT CAAGCTCAAT
GGACATGCGA TCGAGGCACG CGTCTACGCG GAAAACCCCG CGAAGAACTT CATGCCCTCG
GTCGGCACGA TCAAGACCTG GCGGCTGCCG GCGGAGACCG GCGGCCTGCG CATCGATGCC
GGCTATCGCG AGGGTGATGC CGTCTCGCCC TATTACGACG CGATGCTGGC CAAGATGATC
GCCTGGGCGC CGACGCGCGA CGTCGCCATC GAGCGGCTCA ACCGCGGCCT CGAGGACACG
GATGTCCGCG GCATCGTCAG CAACATTCCG TTCCTGTCGG CACTGTTGAC GCATCCCGAC
GTCGCGGCGA ATGCCATCGA CACCGGCTTC ATCGAGCGCC ATCTGGAGCG TCTGACAGAA
GCGGGCGCTG CTGCCGGGGA TGTCGAGCTT TGCGCGGCGG TCGCGGCCGT TCTGATCGAT
GAGCAGAAGG CCGCTTCCCA TGAGGTGGGA TCGCCCTGGC GTGCCCAGGG CTGGATGCCG
GTCGGCTTGC GGGAGCGCGT CTTCTCGTTC CGCCAGAGCG GGAGCAGCGA TCCGCGGACG
GTGACGCTGA CCTATGGACC GGGCGTGCGG ACGCTGTCGA TCGATGGCCG GGTGACGGCG
TTCTCGGCGA TCCCGACAGA GGATGGCGGT TTCGACCTTG TGCGCGACGG CGTCAAATCC
CATGTGGTGG CGGTCATCGA GGGGCACGAA CTGTATCTGC GCTCCCGCAA CGGCCGCTTC
GATCTGCATT GGATCGATCC GTTCGGCGGC GATGACGAGG AACAGGCCGG CGAGGACAAG
ATCGTCGCGC CGTTGCCAGG CACCGTGGTG GCATTGCTGG CGCAGGAAGG CGCCGTCCTC
GAGAAGGGCG CGGCGATCCT GACGCTGGAA GTGATGAAGA TGGAGCAGAC CCTGCGCGCG
CCGTTCGCGG GCGTGCTCAA GGCGATCAAG TGCAAGGTCG GCGACATCGT GCAGGAAGGT
GTCGAACTGG CGGAAGTCGA ACCCTCCGCC TGA
|
|---|
| Protein sequence | MIMAHPGMYR RFRKLLIANR GEIAVRVIRT ARAMGLKTVA VYSEADRNAL HVALADEAVL
LGPARARDSY LNIERLIEAA RQTGAEALHP GYGFLSESAE FAQACLDAGL VFVGPTAAMI
TAMGSKSGSK FLMEQAGVPL VPGYHGEAQD EATLADEAAR IGYPVLIKAS AGGGGRGMRV
VHAAGDLADA VTSAKREAKA AFGDDRVLIE KFVENPRHIE VQIVGDSHGN LVSLFERECT
LQRRHQKVIE EAPSPTLSPA QRETVCAAAR RAAGAVNYVG AGTIEFVSDG RDVFFIEMNT
RLQVEHPVTE LITGVDLVEW QLRVAFGEPL PLTQDQIKLN GHAIEARVYA ENPAKNFMPS
VGTIKTWRLP AETGGLRIDA GYREGDAVSP YYDAMLAKMI AWAPTRDVAI ERLNRGLEDT
DVRGIVSNIP FLSALLTHPD VAANAIDTGF IERHLERLTE AGAAAGDVEL CAAVAAVLID
EQKAASHEVG SPWRAQGWMP VGLRERVFSF RQSGSSDPRT VTLTYGPGVR TLSIDGRVTA
FSAIPTEDGG FDLVRDGVKS HVVAVIEGHE LYLRSRNGRF DLHWIDPFGG DDEEQAGEDK
IVAPLPGTVV ALLAQEGAVL EKGAAILTLE VMKMEQTLRA PFAGVLKAIK CKVGDIVQEG
VELAEVEPSA
|
|---|
| |