More than 300 homologs were found in PanDaTox collection
for query gene Rru_A0052 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  59.37 
 
 		 667 aa  738    Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  58.88 
 
 		 682 aa  772    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  58.83 
 
 		 667 aa  768    Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  59.31 
 
 		 667 aa  774    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  56.8 
 
 		 668 aa  697    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal  1 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  57.86 
 
 		 678 aa  749    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  60.96 
 
 		 667 aa  808    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  53.69 
 
 		 669 aa  695    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  55.54 
 
 		 652 aa  689    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  59.85 
 
 		 675 aa  755    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  58.3 
 
 		 682 aa  761    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  56.08 
 
 		 671 aa  703    Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  0.124901 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  60.06 
 
 		 671 aa  738    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  53.91 
 
 		 669 aa  696    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  59.52 
 
 		 695 aa  768    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  61.48 
 
 		 662 aa  820    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  58.48 
 
 		 671 aa  719    Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.519853 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  58.47 
 
 		 691 aa  762    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  56.45 
 
 		 696 aa  725    Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  58.58 
 
 		 675 aa  754    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.848501 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  59.67 
 
 		 666 aa  776    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  100 
 
 		 662 aa  1362    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  59.79 
 
 		 684 aa  721    Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  58.07 
 
 		 671 aa  723    Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.60166 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  58.19 
 
 		 685 aa  781    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal  1 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  56.49 
 
 		 673 aa  712    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  61.23 
 
 		 670 aa  787    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  58.67 
 
 		 673 aa  758    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.776074 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  57.29 
 
 		 680 aa  764    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal  1 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  56.87 
 
 		 684 aa  736    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  59.73 
 
 		 669 aa  764    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.0599498 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  57.54 
 
 		 671 aa  732    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal  1 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  57.19 
 
 		 678 aa  736    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  58.48 
 
 		 682 aa  759    Polaromonas sp. JS666  Bacteria  normal  1  normal  0.283926 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  56.95 
 
 		 668 aa  677    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  57.99 
 
 		 671 aa  736    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  59.31 
 
 		 667 aa  716    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  58.05 
 
 		 660 aa  717    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  58.46 
 
 		 691 aa  713    Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0379768 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  59.76 
 
 		 671 aa  778    Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.187116 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  58.78 
 
 		 671 aa  718    Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  58.83 
 
 		 667 aa  764    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  57.63 
 
 		 676 aa  770    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  56.55 
 
 		 668 aa  701    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal  1 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  59.79 
 
 		 667 aa  723    Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.390977 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  57.94 
 
 		 681 aa  759    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal  1 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  59.37 
 
 		 666 aa  768    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal  1 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  57.74 
 
 		 670 aa  750    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  58.44 
 
 		 682 aa  763    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal  1 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  58.36 
 
 		 682 aa  760    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal  1 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  59.73 
 
 		 667 aa  758    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  59.79 
 
 		 666 aa  769    Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  58.62 
 
 		 673 aa  736    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  58.15 
 
 		 682 aa  759    Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  53.14 
 
 		 669 aa  664    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.0501395 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  58.13 
 
 		 682 aa  754    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  48.01 
 
 		 691 aa  585  1e-166  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  46.39 
 
 		 656 aa  569  1e-161  Ehrlichia canis str. Jake  Bacteria  normal  1  n/a   
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  45.55 
 
 		 655 aa  559  1e-158  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.51 
 
 		 668 aa  508  9.999999999999999e-143  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_2815  carbamoyl-phosphate synthase L chain, ATP-binding  42.62 
 
 		 654 aa  500  1e-140  Rhodoferax ferrireducens T118  Bacteria  normal  0.102576  n/a   
 
 
-
 
NC_009092  Shew_2573  carbamoyl-phosphate synthase L chain, ATP-binding  43.02 
 
 		 677 aa  498  1e-139  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_1855  carbamoyl-phosphate synthase L chain ATP-binding  46.53 
 
 		 666 aa  498  1e-139  Xanthobacter autotrophicus Py2  Bacteria  normal  0.181486  normal  1 
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  46.37 
 
 		 667 aa  496  1e-139  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  44.86 
 
 		 674 aa  496  1e-139  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  44.46 
 
 		 673 aa  496  1e-139  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  45.53 
 
 		 712 aa  495  9.999999999999999e-139  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  41.34 
 
 		 681 aa  493  9.999999999999999e-139  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0018  biotin carboxylase  44.31 
 
 		 673 aa  493  9.999999999999999e-139  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0039  carbamoyl-phosphate synthase L chain ATP-binding  45.08 
 
 		 655 aa  494  9.999999999999999e-139  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.540073  n/a   
 
 
-
 
NC_006368  lpp1792  hypothetical protein  42.43 
 
 		 654 aa  492  9.999999999999999e-139  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1793  hypothetical protein  42.28 
 
 		 654 aa  495  9.999999999999999e-139  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.8 
 
 		 674 aa  494  9.999999999999999e-139  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  40.83 
 
 		 661 aa  493  9.999999999999999e-139  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  40.83 
 
 		 661 aa  492  9.999999999999999e-139  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  42.75 
 
 		 665 aa  495  9.999999999999999e-139  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.434229 
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  44.86 
 
 		 674 aa  492  1e-137  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  44.02 
 
 		 662 aa  491  1e-137  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_1147  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.64 
 
 		 667 aa  486  1e-136  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.221564 
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  45.48 
 
 		 679 aa  488  1e-136  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  42.75 
 
 		 652 aa  487  1e-136  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  42.77 
 
 		 643 aa  483  1e-135  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  43.53 
 
 		 666 aa  484  1e-135  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  41.69 
 
 		 653 aa  485  1e-135  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal  1 
 
 
-
 
NC_009523  RoseRS_0434  carbamoyl-phosphate synthase L chain, ATP-binding  42.51 
 
 		 659 aa  482  1e-135  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.321717 
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  45.66 
 
 		 675 aa  483  1e-135  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_3559  carbamoyl-phosphate synthase L chain ATP-binding  44.59 
 
 		 670 aa  484  1e-135  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.733851 
 
 
-
 
NC_010676  Bphyt_4689  Carbamoyl-phosphate synthase L chain ATP-binding  43.69 
 
 		 692 aa  484  1e-135  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  40.39 
 
 		 689 aa  484  1e-135  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2694  carbamoyl-phosphate synthase L chain, ATP-binding  41.58 
 
 		 661 aa  481  1e-134  Pseudomonas mendocina ymp  Bacteria  normal  0.250479  normal  0.322946 
 
 
-
 
NC_011992  Dtpsy_3040  Carbamoyl-phosphate synthase L chain ATP-binding  45.03 
 
 		 672 aa  479  1e-134  Acidovorax ebreus TPSY  Bacteria  normal  0.233889  n/a   
 
 
-
 
NC_007347  Reut_A1463  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.27 
 
 		 674 aa  480  1e-134  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  54.59 
 
 		 499 aa  479  1e-134  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B0963  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.44 
 
 		 679 aa  481  1e-134  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.5845 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  54.95 
 
 		 498 aa  481  1e-134  Methanococcoides burtonii DSM 6242  Archaea  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  55.86 
 
 		 450 aa  481  1e-134  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4585  carbamoyl-phosphate synthase L chain, ATP-binding  45.39 
 
 		 666 aa  479  1e-134  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.747689 
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  54.4 
 
 		 448 aa  476  1e-133  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_011138  MADE_02415  methylcrotonyl-CoA carboxylase, alpha subunit  42.37 
 
 		 666 aa  478  1e-133  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2928  carbamoyl-phosphate synthase L chain, ATP-binding  40.74 
 
 		 675 aa  476  1e-133  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.321789  n/a   
 
 
-
 
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