| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1223 |
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| Symbol | |
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| ID | 4080447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1267078 |
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| End bp | 1269084 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009583 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_616271 |
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| Protein GI | 103486710 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.116496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAAGA AAATCCTGAT CGCCAACCGC GGCGAAATCG CCTGCCGCGT CATCAAGACC
GCGCGCCGCA TGGGCATCGC GACGGTCGCC GTCTATTCGG ACGCCGATGC GCGCGCGCCC
TTTGTCCAGA TGGCTGACGA GGCGGTGCAT ATCGGGCCGT CGCCCGCGTC CGAATCCTAT
CTGGTCGCCG ACAAGATCAT CGCCGCGTGC AAGGCGACGG GCGCCGAGGC GGTGCATCCG
GGCTATGGCT TCCTGTCCGA GCGCACCAGC TTCGCCGAGG CGCTCGCGAA GGAAAATATC
GCCTTCATCG GCCCGCCGGT GAACGCGATC GCGGCGATGG GCGACAAGAT CGAGTCGAAG
AAGCTCGCGA AAGAGGCGGG GGTCAATGTC GTCCCCGGCT TCGTCGGCGA GATCCGCGAC
ACCGAACATG CGGTCGAGAT TTCGAACGAG ATCGGCTATC CGGTGATGAT GAAGGCGTCG
GCGGGCGGCG GCGGCAAGGG GATGCGCCTC GCCTATGACG AGAAGGACGT CCGCGAGGGG
TTCGAGGCGA CCAAGCGCGA GGGGCTCAAC AGCTTTGGCG ACGACCGCGT GTTTATCGAG
AAGTTCATCC TCAACCCGCG CCATATCGAA ATCCAGATCC TCGGCGATCA GCACGGCAAC
ATTCTCTACC TCAACGAGCG CGAATGCAGC ATCCAGCGGC GGCATCAGAA GGTCGTCGAG
GAAGCGCCGT CGCCCTTCGT CACGCCGAAG ATGCGTCAGG CGATGGGCGA GCAGTGCGTC
GCGCTGGCGC GCGCGGTCGG CTATTACAGC GCAGGCACGG TCGAGCTGAT CGTGTCGGGC
GCCGACCCGA CGGGCGAGAG CTTCTACTTC CTCGAAATGA ACACGCGGCT GCAGGTCGAG
CATCCGGTGA CCGAGGCGAT CACCGGCATC GACCTGGTCG AGCAGATGAT CCGCGTCGCC
GCGGGCGAAA AGCTGGAGAT GACGCAGGAC GACATCAAGA TCGACGGCTG GGCGATCGAG
AATCGCGTCT ATGCCGAAGA TCCCTATCGC GGCTTCCTGC CCTCGACCGG GCGGCTCGTG
CGCTACCGCA CCCCCGTTCC CGCATGGACG GGCGACGAGC GCGGCGTCGA TGGTGTGCGC
GTCGATGCGG GGGTTGAGGA GGGCGGCGAG GTGTCGATCT TCTACGACCC GATGATCGCG
AAGCTGGTGA CATGGGGCAA GACGCGCGAC GAGGCGGCGG ACCTTCAGGT CGCGGCGCTC
GACCGTTTCG AGATCGAGGG GCTGGGCCAC AATATCGATT TCGTGTCGGC GATCATGCAG
CACCCGCGCT TCCGCTCGGG CGAACTGACG ACGGGCTTTA TCGCCGAGGA ATATCCCGAG
GGGTTCCACG GTGCCGACAC CAGCGAGGAT GTGACCCAGG CACTCGCCGC CATCGCGGGC
TTTATGGCGA GCGCCGAAGC CGACCGCGCA CGGCGCACCG ACGGACAGCT CGGCGACCGG
CTCGACCCGC CCGCCAAGTG GCAGGTGACC ATCGGCGGCG CGAGCCACAA GGTGAAGATC
GGCCGCAAGC ACATCAAGGT CGATGGTGAG AAGGTCGATA TCGCGCTCGA ATATACGCCG
GGCGACCGGT TGGTGGTCGC CGAGATCGAC GATAGCGAGC TTGCGGTGAA GGTCGCCAAA
ACGCGCACCG GCTGGCGCAT GACGACGCGC GGGCGCATCC ATGACGTGCG CGTGCTGCCT
TGGCATGTCG CACCACTCGC AAGCCATATG ATCGAGAAGA TCCCGCCCGA CCTGTCGAAG
TTTCTGATCT GCCCGATGCC CGGCTTGCTT GTCGCGCTGC ATGTGGGCGA GGGCGACAAG
GTCGAGGCAG GTCAGCCGCT CGCGACGGTC GAGGCGATGA AGATGGAAAA TATCCTGCGC
GCCGAAAAAG CGGGCGTTGT GAAGTCGGTC AATGCAGCGC AGGGCGACAG CCTGGCGGTC
GATGCCGTGA TTTTGGAGAT GGAGTGA
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| Protein sequence | MFKKILIANR GEIACRVIKT ARRMGIATVA VYSDADARAP FVQMADEAVH IGPSPASESY
LVADKIIAAC KATGAEAVHP GYGFLSERTS FAEALAKENI AFIGPPVNAI AAMGDKIESK
KLAKEAGVNV VPGFVGEIRD TEHAVEISNE IGYPVMMKAS AGGGGKGMRL AYDEKDVREG
FEATKREGLN SFGDDRVFIE KFILNPRHIE IQILGDQHGN ILYLNERECS IQRRHQKVVE
EAPSPFVTPK MRQAMGEQCV ALARAVGYYS AGTVELIVSG ADPTGESFYF LEMNTRLQVE
HPVTEAITGI DLVEQMIRVA AGEKLEMTQD DIKIDGWAIE NRVYAEDPYR GFLPSTGRLV
RYRTPVPAWT GDERGVDGVR VDAGVEEGGE VSIFYDPMIA KLVTWGKTRD EAADLQVAAL
DRFEIEGLGH NIDFVSAIMQ HPRFRSGELT TGFIAEEYPE GFHGADTSED VTQALAAIAG
FMASAEADRA RRTDGQLGDR LDPPAKWQVT IGGASHKVKI GRKHIKVDGE KVDIALEYTP
GDRLVVAEID DSELAVKVAK TRTGWRMTTR GRIHDVRVLP WHVAPLASHM IEKIPPDLSK
FLICPMPGLL VALHVGEGDK VEAGQPLATV EAMKMENILR AEKAGVVKSV NAAQGDSLAV
DAVILEME
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