More than 300 homologs were found in PanDaTox collection
for query gene Mpop_3181 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  56.98 
 
 
678 aa  723    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 
667 aa  1354    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  62.52 
 
 
667 aa  806    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  58.75 
 
 
669 aa  770    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  67.66 
 
 
668 aa  885    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  95.65 
 
 
684 aa  1259    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  55.93 
 
 
682 aa  699    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  62.37 
 
 
667 aa  801    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  72.77 
 
 
671 aa  953    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  63 
 
 
671 aa  805    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  56.11 
 
 
652 aa  695    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  57.16 
 
 
675 aa  708    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  56.8 
 
 
667 aa  703    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  58.66 
 
 
682 aa  713    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  70.24 
 
 
671 aa  904    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  73.89 
 
 
671 aa  951    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  61.17 
 
 
670 aa  796    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  60.66 
 
 
666 aa  789    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  63.21 
 
 
695 aa  811    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  55.27 
 
 
682 aa  696    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  63.06 
 
 
666 aa  811    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  62.22 
 
 
667 aa  801    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  60.79 
 
 
681 aa  785    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  60.09 
 
 
660 aa  738    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  59.37 
 
 
662 aa  746    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  57.54 
 
 
682 aa  714    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  59.94 
 
 
685 aa  770    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  72.62 
 
 
671 aa  937    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  64.64 
 
 
673 aa  843    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  58.91 
 
 
673 aa  729    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  59.2 
 
 
669 aa  771    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  60.35 
 
 
680 aa  768    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  56.02 
 
 
684 aa  695    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  55.07 
 
 
696 aa  689    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  85.25 
 
 
671 aa  1128    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  73.21 
 
 
671 aa  952    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  56.71 
 
 
682 aa  699    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  57.87 
 
 
662 aa  717    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  86.51 
 
 
667 aa  1130    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  66.96 
 
 
669 aa  868    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  73.36 
 
 
691 aa  923    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  72.62 
 
 
671 aa  923    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  56.48 
 
 
691 aa  707    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  73.52 
 
 
675 aa  961    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  60.71 
 
 
676 aa  801    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  57.27 
 
 
668 aa  711    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  57.25 
 
 
682 aa  712    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  62.76 
 
 
666 aa  805    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  56.53 
 
 
678 aa  716    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  63.84 
 
 
670 aa  827    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  72.56 
 
 
668 aa  933    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  61.77 
 
 
667 aa  775    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  55.21 
 
 
669 aa  680    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  95.65 
 
 
667 aa  1260    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  84.4 
 
 
673 aa  1136    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  57.54 
 
 
682 aa  713    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  47.32 
 
 
655 aa  602  1.0000000000000001e-171  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  45.87 
 
 
656 aa  590  1e-167  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  43.91 
 
 
691 aa  568  1e-160  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  49.93 
 
 
667 aa  536  1e-151  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  44.01 
 
 
681 aa  524  1e-147  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.67 
 
 
666 aa  522  1e-147  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  48.09 
 
 
674 aa  516  1.0000000000000001e-145  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.41 
 
 
668 aa  516  1.0000000000000001e-145  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  46.18 
 
 
662 aa  518  1.0000000000000001e-145  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  43.05 
 
 
652 aa  515  1e-144  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  42.66 
 
 
689 aa  515  1e-144  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  44.26 
 
 
665 aa  511  1e-143  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  46.23 
 
 
679 aa  509  1e-143  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_011004  Rpal_2809  Carbamoyl-phosphate synthase L chain ATP-binding  45.2 
 
 
670 aa  504  1e-141  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.978814  n/a   
 
 
-
 
NC_010086  Bmul_3469  carbamoyl-phosphate synthase L chain ATP-binding  47.5 
 
 
670 aa  504  1e-141  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1792  hypothetical protein  42.29 
 
 
654 aa  505  1e-141  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1793  hypothetical protein  41.86 
 
 
654 aa  504  1e-141  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  47.04 
 
 
660 aa  505  1e-141  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal 
 
 
-
 
NC_013457  VEA_000380  methylcrotonyl-CoA carboxylase biotin-containing subunit  42.42 
 
 
686 aa  504  1e-141  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4585  carbamoyl-phosphate synthase L chain, ATP-binding  47.04 
 
 
666 aa  500  1e-140  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.747689 
 
 
-
 
NC_007964  Nham_2124  carbamoyl-phosphate synthase L chain, ATP-binding  44.49 
 
 
666 aa  501  1e-140  Nitrobacter hamburgensis X14  Bacteria  normal  0.494302  n/a   
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  46.49 
 
 
712 aa  498  1e-139  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5118  carbamoyl-phosphate synthase L chain ATP-binding  46.89 
 
 
666 aa  498  1e-139  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  43.52 
 
 
661 aa  498  1e-139  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_010623  Bphy_3559  carbamoyl-phosphate synthase L chain ATP-binding  46.38 
 
 
670 aa  498  1e-139  Burkholderia phymatum STM815  Bacteria  normal  normal  0.733851 
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  45.84 
 
 
674 aa  495  9.999999999999999e-139  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4048  putative acyl-CoA carboxylase biotin-carrying subunit  44.71 
 
 
670 aa  492  9.999999999999999e-139  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.139435  normal  0.287749 
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  46.35 
 
 
662 aa  495  9.999999999999999e-139  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_013730  Slin_3536  Carbamoyl-phosphate synthase L chain ATP- binding protein  53.62 
 
 
517 aa  493  9.999999999999999e-139  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  46.09 
 
 
674 aa  494  9.999999999999999e-139  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1473  Carbamoyl-phosphate synthase L chain ATP- binding protein  44.05 
 
 
666 aa  495  9.999999999999999e-139  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2928  carbamoyl-phosphate synthase L chain, ATP-binding  43.7 
 
 
675 aa  495  9.999999999999999e-139  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.321789  n/a   
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  54.22 
 
 
450 aa  493  9.999999999999999e-139  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  42.05 
 
 
700 aa  489  1e-137  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  55.51 
 
 
480 aa  490  1e-137  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_007948  Bpro_4157  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.02 
 
 
663 aa  489  1e-137  Polaromonas sp. JS666  Bacteria  normal  0.825758  normal 
 
 
-
 
NC_007952  Bxe_B0963  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.7 
 
 
679 aa  489  1e-137  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.5845 
 
 
-
 
NC_007954  Sden_2248  carbamoyl-phosphate synthase L chain, ATP-binding  41.89 
 
 
697 aa  489  1e-137  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  45.47 
 
 
675 aa  490  1e-137  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5237  carbamoyl-phosphate synthase L chain, ATP-binding  45.99 
 
 
665 aa  489  1e-136  Burkholderia cenocepacia HI2424  Bacteria  normal  0.578975  normal  0.758885 
 
 
-
 
NC_007005  Psyr_2467  carbamoyl-phosphate synthase subunit L  43.3 
 
 
649 aa  485  1e-136  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.30197  normal  0.0144387 
 
 
-
 
NC_008726  Mvan_4090  carbamoyl-phosphate synthase L chain, ATP-binding  44.94 
 
 
660 aa  486  1e-136  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.734303  normal 
 
 
-
 
NC_008825  Mpe_A3356  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.91 
 
 
672 aa  486  1e-136  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.782884 
 
 
-
 
NC_008061  Bcen_3130  carbamoyl-phosphate synthase L chain, ATP-binding  45.99 
 
 
665 aa  489  1e-136  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
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