| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0608 |
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| Symbol | |
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| ID | 4037397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 659923 |
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| End bp | 661962 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637975983 |
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| Product | 3-methylcrotonoyl-CoA carboxylase, subunit alpha |
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| Protein accession | YP_582763 |
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| Protein GI | 94309553 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00695575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.371744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACGA AGATCCTGAT TGCGAACCGT GGCGAGATCG CCTGCCGTGT GGCGGCCACC
TGCCGCCGCC TCGGCATCCG CACCGTGGCC GTCTACTCCG ACGCCGACGC CAACGCGCGA
CACGTCGCCT TCTGCGACGA GGCCGTGCAT ATTGGTGGCG CCGCCGCGCG AGACAGCTAC
CTGCGCGCGG ACCACATCAT CGAAATGGCG AAGGAGACCG GCGCCCAGGC GATCCACCCT
GGCTACGGCT TCCTGTCCGA GAACGAGGAC TTCGCGCGCG CCTGCGCCGA AGCCGGCCTC
GTGTTCATCG GCCCGCCTGC CTCTGCAATC CACGCAATGG GCAGCAAGAG CGCGGCCAAG
CAACTGATGG AAAAGGCCGC GGTACCGCTG GTGCCCGGCT ATCACGGCGA AGACCAGGAC
GCCACCCTGC TGCGGCGCGA GGCCGACCGT ATCGGCTATC CGGTGCTGCT CAAGGCCAGC
GCGGGCGGTG GCGGCAAGGG CATGCGCGTG GTGGAAGCTG GGGATGGCTT CGACGCCGCG
CTGGCCTCGG TGAAGCGCGA GGCGTCGGCC AGCTTCGGCG ACGACAAGGT GCTGGTGGAG
AAATACCTGA CCCGGCCGCG CCATATCGAG ATCCAGGTCT TTGCCGATTC GCACGGCAAC
TGCGTCTACC TGTTCGAGCG TGACTGCTCG GTGCAACGTC GCCACCAGAA GGTGCTGGAA
GAAGCGCCGG CGCCGGGCAT GACCGAGGAA CGCCGCCGCG CGATGGGCGA GGCGGCGGTG
GCCGCGGCGC GCGCAGTGGG TTACGTCGGC GCGGGCACGG TCGAGTTCAT CGCCAACCAG
GATGGCTCGT TCTACTTCAT GGAGATGAAC ACGCGCCTGC AGGTGGAGCA TCCGGTCACC
GAGATGATCA CTGGCCAGGA CCTGGTGGAA TGGCAACTGC GCGTCGCGGC CGGCGAGGCG
CTGCCGCTGG CGCAGGAGCA ACTGGCCATC CACGGCCATT CGCTGGAAGC GCGCATCTAC
GCCGAGAACC CAGACAAGCA GTTCCTGCCG TCAACGGGCA CGCTGCGCTT CCTGCGCACG
CCGCCCGCGG TGCAGTTCAT GCGCGGCGGC GATGCCAACG CGCCGGCTGC GGTCCGCATT
GACGCGGGCG TGCGCGAAGG CGATACGATC AGCCCGTACT ACGACCCGAT GATCGCCAAG
CTGATCGTCT GGGGCCGCGA TCGCGACCAG GCACTGGCGC GCATGGCCCA GGCACTGGCC
GGGTATCACG TGGTGGGGCT GTCGACCAAC GTCGCCTTCC TGCAGCGGCT GGTGAAATCG
GAGGCTTTCC GTACCGCCGA CCTCGACACC GGCCTGATCG AACGCAACCA GACAGTACTG
TTCCCGCCGC AGAAGACGGC TGGCATCGAA GCGATCGCGC TGGCGATGGC GGCACTGCTC
GAACGCGAGA CGCGCACACG CCGCATCGAC GAGGCGGACC GCCACTCGCC GTGGACCCAC
GCGGGCGGCT GGCGACTGAA CGGCCGCGAC GTGCGCACGT TGCACTTCCA AGGCGGCGGC
CACAAGCTCG AGGCCGTGCT GAAGGGCAAC GCCAGCGACA CCAGCAAGAA CACGCTGATC
TACGCCGACC AGGCCGCGCC GTTCGCGTAC ACGTTCAATG CCGACGATAT CCGCGTCGAC
CTTGGCACGC GCCGCACGCA CGGCCAGGTG CACGTGGAAG GCGACACGTT CCACGTCTTC
CACGACGGCC GCCATACGGT GCTGGAGTGG CTCGACCCGC TTGCGCACGC CAGCGAGAGT
GAAGGCGAAG GCGGCAAGCT GACCGCGCCG ATGCCGGGCA AGGTGATCGC CGTGATGGTC
GAGGCCGGCA GCAAGGTCAC GCGCGGCACG CCGCTGCTGG TGATGGAAGC GATGAAGATG
GAACACACGA TCGCCGCGCC GGCCGATGGC GTGGTGAGCG AGGTGCTCTA CGGCGTGGGC
GAACAGGTGA GCGAGGGCGC GCAACTGCTG GCATTCGCCT TGGCGGAGGC AGCGGCCTAA
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| Protein sequence | MFTKILIANR GEIACRVAAT CRRLGIRTVA VYSDADANAR HVAFCDEAVH IGGAAARDSY
LRADHIIEMA KETGAQAIHP GYGFLSENED FARACAEAGL VFIGPPASAI HAMGSKSAAK
QLMEKAAVPL VPGYHGEDQD ATLLRREADR IGYPVLLKAS AGGGGKGMRV VEAGDGFDAA
LASVKREASA SFGDDKVLVE KYLTRPRHIE IQVFADSHGN CVYLFERDCS VQRRHQKVLE
EAPAPGMTEE RRRAMGEAAV AAARAVGYVG AGTVEFIANQ DGSFYFMEMN TRLQVEHPVT
EMITGQDLVE WQLRVAAGEA LPLAQEQLAI HGHSLEARIY AENPDKQFLP STGTLRFLRT
PPAVQFMRGG DANAPAAVRI DAGVREGDTI SPYYDPMIAK LIVWGRDRDQ ALARMAQALA
GYHVVGLSTN VAFLQRLVKS EAFRTADLDT GLIERNQTVL FPPQKTAGIE AIALAMAALL
ERETRTRRID EADRHSPWTH AGGWRLNGRD VRTLHFQGGG HKLEAVLKGN ASDTSKNTLI
YADQAAPFAY TFNADDIRVD LGTRRTHGQV HVEGDTFHVF HDGRHTVLEW LDPLAHASES
EGEGGKLTAP MPGKVIAVMV EAGSKVTRGT PLLVMEAMKM EHTIAAPADG VVSEVLYGVG
EQVSEGAQLL AFALAEAAA
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