| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2248 |
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| Symbol | |
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| ID | 4018740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2669619 |
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| End bp | 2671712 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637956270 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_563251 |
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| Protein GI | 91793600 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACTA AGTTACTTAT CGCCAACCGC GGTGAAATCG CCTGTCGCAT CATCAAAACC
GCAAAAAGTA TGGGTGTGCG CACCATTGCC TTGTATTCGG ATGCCGACAA AGACGCTCGT
CACGTGGCCA TGGCCGATGA ATCTTTCTAT TTAGGCGGCA GTGCACCGGC AGATTCCTAT
TTAAAAGCCG ATCTTATTAT CGACATCGCC AAGAAAGCCG GCGCCGGTGC CATTCACCCA
GGCTATGGTT TCTTGTCTGA AAACGCCGAA TTTGCCCGCA AGTGTGAGCA AAATGGCATT
GCCTTCGTGG GCCCTGGCAG TGAAGCCATC GAAGCCATGG GCAGTAAAAG CGCAGCAAAA
GAAATCATGG GTAAGGCCAA TGTGCCGTTA GTGCCAGGCT ACCATGGCGA TGACCAAACC
GATGACAACC TAGTACAACA AGCCAAACTT ATCGGCTTTC CACTGCTTAT CAAGGCGGCC
TACGGCGGCG GCGGTAAAGG CATGCGTATC GTTGAAAATG AAGGTGAAAT ATTAGCGGCG
GTGAAATCTG CCCGCCGTGA AGCCACCTCT TCATTTGGTA ACGACAAGCT GTTAATGGAG
CGCTACCTGC GCCAACCTAG GCACGTTGAA GTGCAAGTGT TTGCCGACAC CCATGGCAAC
GCGATTTACC TGTCAGATCG AGACTGCTCT ATTCAGCGCC GCCATCAAAA AGTGGTGGAA
GAAGCCCCAG CGCCGGGTTT ATCCGACGCC CTTCGCGCAC AAATGGGTCA AGCCGCGGTC
GCCGCAGCTA AAGCCATAGA TTATGTGGGT GCGGGCACAG TTGAGTTTTT GCTCGATACC
CTAGCCACCG ATGAGAGCAG CAGCTTCTAC TTTATGGAAA TGAACACCCG CTTACAGGTT
GAGCATCCAG TGACAGAAAT GGTTACCGGG CAAGACTTAG TTAAGTGGCA GCTGATGGTC
GCCAGTGGCG ATGAATTACC CCTAACACAG CAAGAAGTGC GCATTCACGG CCACTCTTTT
GAAGTGCGTA TTTACGCTGA AGATCCGCAG AATGATTTTC TGCCCGCCAG CGGCAAATTA
AACTTTTTGC GTGAACCTGA ACAAAACCAG CATGTGCGTA TAGATTCAGG CATACGTGAG
AACGATGTCA TCAGTAACTT CTATGACCCC ATGATAGCCA AGCTCATCGT ATGGGATGAC
TCGCGCCCCC GCGCCCTGCA GCGCCTGGTA CATGCCCTTG AGTCCTATCA GATAAGTGGC
CTTAGGCACA ACATAGAGTT CTTGGCCAAT ATCGCCGAGC ACCCCGCCTT TGCCGCCGCC
GACTTTAGCA CAGACTTTAT CGAACGCTAC GGTGATGCCC TGATTGGCAG CGCCTCCAGC
GAAGCCCAAA CCGCGTTAGC GTTAGCAGGG CTGTATCAAG TGCTATCCCG CAAGCAAGCG
GCAAAAGCCT TGGCAATTAA TAGTCAAGAC CCTCACTCTC CTTGGGGACA AATGAGCGGC
TTTAGGCTCA ATAGCGACAG CATTCATCAT GTGGCGTTAT TATCTGATGA AACCAAAGAC
CCTGACAGCA AAGAAAGCCT GCAGCCGCTG CACAACTTAT TGCTTGTGGC TCAAGGTGAT
GGTTATCAAT TAACCTTAGT TAACGAATAT ACCTTAGACG AGCAAGTGCT TAACCTCAGT
GGCGAGCTAA GGGATGATTT GTTATTGGCG GAAATCAACG GCCATAAGTC TAAAATCCCG
GTAAGCCATC AAGGGGATGA TTTCACCTTG TTCTTGTCCT CTGGAAGCTA TCATTTCAAG
GCGGTATTGG CTCAAATTGC TGAAGAGCAA GTTAACAGTG CTGATAAACT TAAAGCACCG
ATGAATGGCA CTGTAGTGAC TCATTTAGTG GATGTTGGCG CTAGCGTTAC CGCTGGCCAA
GGCTTATTGG TGATGGAAGC CATGAAGATG GAATACACCA TAGAAGCGCC TTTTGATGGC
ACAGTGACGG CGTTTTATTT CCAAAGCGGC GAGTTAGTCA CAGACGGTGC TCAGCTGCTT
GAAGTCGAGC CGCTAGCTGT CGACATAGTA AACGCTAACA ACAAGGAGGC CTAG
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| Protein sequence | MFTKLLIANR GEIACRIIKT AKSMGVRTIA LYSDADKDAR HVAMADESFY LGGSAPADSY
LKADLIIDIA KKAGAGAIHP GYGFLSENAE FARKCEQNGI AFVGPGSEAI EAMGSKSAAK
EIMGKANVPL VPGYHGDDQT DDNLVQQAKL IGFPLLIKAA YGGGGKGMRI VENEGEILAA
VKSARREATS SFGNDKLLME RYLRQPRHVE VQVFADTHGN AIYLSDRDCS IQRRHQKVVE
EAPAPGLSDA LRAQMGQAAV AAAKAIDYVG AGTVEFLLDT LATDESSSFY FMEMNTRLQV
EHPVTEMVTG QDLVKWQLMV ASGDELPLTQ QEVRIHGHSF EVRIYAEDPQ NDFLPASGKL
NFLREPEQNQ HVRIDSGIRE NDVISNFYDP MIAKLIVWDD SRPRALQRLV HALESYQISG
LRHNIEFLAN IAEHPAFAAA DFSTDFIERY GDALIGSASS EAQTALALAG LYQVLSRKQA
AKALAINSQD PHSPWGQMSG FRLNSDSIHH VALLSDETKD PDSKESLQPL HNLLLVAQGD
GYQLTLVNEY TLDEQVLNLS GELRDDLLLA EINGHKSKIP VSHQGDDFTL FLSSGSYHFK
AVLAQIAEEQ VNSADKLKAP MNGTVVTHLV DVGASVTAGQ GLLVMEAMKM EYTIEAPFDG
TVTAFYFQSG ELVTDGAQLL EVEPLAVDIV NANNKEA
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