More than 300 homologs were found in PanDaTox collection
for query gene Ajs_2043 on replicon NC_008782
Organism: Acidovorax sp. JS42



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  56.58 
 
 
667 aa  716    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  56.04 
 
 
671 aa  687    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  57.12 
 
 
667 aa  707    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  57.75 
 
 
684 aa  698    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  57.18 
 
 
667 aa  681    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  56.95 
 
 
667 aa  723    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  82.09 
 
 
682 aa  1144    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  85.04 
 
 
682 aa  1179    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  54.32 
 
 
669 aa  673    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  57.81 
 
 
675 aa  715    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  68.37 
 
 
667 aa  891    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  74.63 
 
 
675 aa  1021    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  55.62 
 
 
670 aa  710    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  54.73 
 
 
671 aa  674    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  100 
 
 
682 aa  1397    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  57.23 
 
 
695 aa  729    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  58.6 
 
 
671 aa  744    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  77.97 
 
 
691 aa  1090    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  57.06 
 
 
673 aa  705    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  55.83 
 
 
660 aa  696    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  58.44 
 
 
662 aa  764    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  79.59 
 
 
682 aa  1088    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  58.24 
 
 
673 aa  726    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  55.52 
 
 
671 aa  682    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  57.68 
 
 
685 aa  754    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  56.09 
 
 
673 aa  695    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  68.75 
 
 
678 aa  901    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  55.46 
 
 
671 aa  685    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  56.36 
 
 
680 aa  727    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  77.75 
 
 
684 aa  1076    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  53.91 
 
 
669 aa  676    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  57.66 
 
 
666 aa  735    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  53.09 
 
 
652 aa  671    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  54.21 
 
 
671 aa  690    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  79.74 
 
 
682 aa  1109    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  86.66 
 
 
682 aa  1202    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  55.13 
 
 
668 aa  686    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  59.16 
 
 
669 aa  745    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  58 
 
 
666 aa  729    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  55.52 
 
 
691 aa  671    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  57.37 
 
 
666 aa  732    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  56.09 
 
 
671 aa  686    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  54.9 
 
 
668 aa  652    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  57.56 
 
 
676 aa  746    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  56.41 
 
 
668 aa  706    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  56.52 
 
 
667 aa  715    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  55.87 
 
 
667 aa  726    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  56.66 
 
 
671 aa  693    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  57.75 
 
 
667 aa  698    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  54.57 
 
 
670 aa  690    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  82.4 
 
 
696 aa  1144    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  57.51 
 
 
681 aa  738    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  69.4 
 
 
662 aa  911    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  99.41 
 
 
682 aa  1391    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  51.9 
 
 
669 aa  641    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  68.94 
 
 
678 aa  905    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  45.69 
 
 
655 aa  552  1e-156  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  44.2 
 
 
656 aa  549  1e-155  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  43.41 
 
 
691 aa  531  1e-149  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  43.67 
 
 
665 aa  519  1e-146  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  45.76 
 
 
660 aa  519  1e-146  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal 
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  45.9 
 
 
667 aa  518  1.0000000000000001e-145  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.89 
 
 
668 aa  516  1.0000000000000001e-145  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  54.41 
 
 
498 aa  512  1e-144  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.09 
 
 
674 aa  511  1e-143  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  43.7 
 
 
681 aa  506  9.999999999999999e-143  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  46.43 
 
 
675 aa  508  9.999999999999999e-143  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  56.17 
 
 
450 aa  506  9.999999999999999e-143  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3356  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.38 
 
 
672 aa  507  9.999999999999999e-143  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.782884 
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  45.76 
 
 
679 aa  505  1e-141  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  45.17 
 
 
662 aa  499  1e-140  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  46.03 
 
 
674 aa  500  1e-140  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  46.03 
 
 
674 aa  501  1e-140  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  45.12 
 
 
712 aa  496  1e-139  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  45.32 
 
 
662 aa  496  1e-139  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_007347  Reut_A1463  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.02 
 
 
674 aa  495  1e-139  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4157  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.86 
 
 
663 aa  496  1e-139  Polaromonas sp. JS666  Bacteria  normal  0.825758  normal 
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  53.2 
 
 
499 aa  498  1e-139  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  44.62 
 
 
661 aa  495  9.999999999999999e-139  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  54.73 
 
 
450 aa  492  9.999999999999999e-139  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010086  Bmul_3469  carbamoyl-phosphate synthase L chain ATP-binding  44.1 
 
 
670 aa  491  1e-137  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2467  carbamoyl-phosphate synthase subunit L  43.98 
 
 
649 aa  491  1e-137  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.30197  normal  0.0144387 
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  43.81 
 
 
700 aa  491  1e-137  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  42.86 
 
 
643 aa  490  1e-137  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5237  carbamoyl-phosphate synthase L chain, ATP-binding  45.11 
 
 
665 aa  490  1e-137  Burkholderia cenocepacia HI2424  Bacteria  normal  0.578975  normal  0.758885 
 
 
-
 
NC_008061  Bcen_3130  carbamoyl-phosphate synthase L chain, ATP-binding  45.11 
 
 
665 aa  490  1e-137  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5035  carbamoyl-phosphate synthase L chain ATP-binding  44.96 
 
 
665 aa  489  1e-137  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.70526  normal 
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  44.33 
 
 
661 aa  491  1e-137  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  53.96 
 
 
493 aa  486  1e-136  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  42.67 
 
 
653 aa  486  1e-136  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_009523  RoseRS_0434  carbamoyl-phosphate synthase L chain, ATP-binding  42.24 
 
 
659 aa  488  1e-136  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.321717 
 
 
-
 
NC_010676  Bphyt_4689  Carbamoyl-phosphate synthase L chain ATP-binding  43.74 
 
 
692 aa  486  1e-136  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1521  acetyl-CoA carboxylase, biotin carboxylase  55.15 
 
 
494 aa  484  1e-135  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  58.09 
 
 
666 aa  482  1e-135  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0426  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.2 
 
 
665 aa  482  1e-135  Burkholderia sp. 383  Bacteria  normal  0.967801  normal 
 
 
-
 
NC_008726  Mvan_4090  carbamoyl-phosphate synthase L chain, ATP-binding  43.52 
 
 
660 aa  483  1e-135  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.734303  normal 
 
 
-
 
NC_008345  Sfri_2730  carbamoyl-phosphate synthase L chain, ATP-binding  41.54 
 
 
676 aa  483  1e-135  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3040  Carbamoyl-phosphate synthase L chain ATP-binding  45.64 
 
 
672 aa  479  1e-134  Acidovorax ebreus TPSY  Bacteria  normal  0.233889  n/a   
 
 
-
 
NC_008752  Aave_4351  3-methylcrotonoyl-CoA carboxylase, alpha subunit  44.33 
 
 
677 aa  479  1e-134  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3559  carbamoyl-phosphate synthase L chain ATP-binding  44.12 
 
 
670 aa  480  1e-134  Burkholderia phymatum STM815  Bacteria  normal  normal  0.733851 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>