More than 300 homologs were found in PanDaTox collection
for query gene Rpal_3585 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  55.47 
 
 		 682 aa  692    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  64.23 
 
 		 671 aa  846    Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.187116 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  59.85 
 
 		 681 aa  774    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal  1 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  72.77 
 
 		 667 aa  934    Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  62.5 
 
 		 667 aa  789    Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  61.79 
 
 		 666 aa  798    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  60.75 
 
 		 666 aa  775    Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  55.37 
 
 		 669 aa  702    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.0501395 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  59.79 
 
 		 660 aa  743    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  60.8 
 
 		 667 aa  757    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  56.59 
 
 		 667 aa  715    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  59.47 
 
 		 669 aa  767    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  55.18 
 
 		 682 aa  693    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal  1 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  55.46 
 
 		 682 aa  684    Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  72.71 
 
 		 673 aa  951    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  81.97 
 
 		 671 aa  1101    Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  0.124901 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  64.09 
 
 		 673 aa  838    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.776074 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  63.61 
 
 		 695 aa  813    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  67.11 
 
 		 668 aa  855    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  53.43 
 
 		 696 aa  658    Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  55.46 
 
 		 682 aa  684    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal  1 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  59.15 
 
 		 669 aa  768    Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  73.93 
 
 		 675 aa  994    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  57.29 
 
 		 678 aa  725    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  54.36 
 
 		 691 aa  706    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  57.99 
 
 		 662 aa  737    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  55.97 
 
 		 652 aa  688    Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  71.73 
 
 		 684 aa  921    Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  92.1 
 
 		 671 aa  1236    Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.60166 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  73.51 
 
 		 667 aa  917    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  58.63 
 
 		 673 aa  735    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  55.41 
 
 		 675 aa  698    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.848501 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  58.62 
 
 		 662 aa  739    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  60.93 
 
 		 680 aa  780    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal  1 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  54.07 
 
 		 684 aa  687    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  62.35 
 
 		 667 aa  786    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  63.46 
 
 		 666 aa  813    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal  1 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  90.31 
 
 		 671 aa  1228    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal  1 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  55.67 
 
 		 682 aa  700    Polaromonas sp. JS666  Bacteria  normal  1  normal  0.283926 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  73.44 
 
 		 671 aa  950    Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.519853 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  60.41 
 
 		 670 aa  783    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  56.7 
 
 		 678 aa  717    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  68.69 
 
 		 668 aa  883    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal  1 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  86.14 
 
 		 671 aa  1145    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  92.85 
 
 		 691 aa  1228    Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  84.65 
 
 		 671 aa  1122    Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  54.84 
 
 		 682 aa  700    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  60.95 
 
 		 667 aa  778    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  59.71 
 
 		 676 aa  778    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  56.54 
 
 		 668 aa  711    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal  1 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  59.04 
 
 		 685 aa  780    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal  1 
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 		 671 aa  1362    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  71.58 
 
 		 667 aa  919    Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.390977 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  63.6 
 
 		 670 aa  821    Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  56.54 
 
 		 682 aa  711    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  66.57 
 
 		 669 aa  863    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.0599498 
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  45.79 
 
 		 656 aa  572  1.0000000000000001e-162  Ehrlichia canis str. Jake  Bacteria  normal  1  n/a   
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  45.64 
 
 		 655 aa  563  1.0000000000000001e-159  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  1  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  43.98 
 
 		 691 aa  540  9.999999999999999e-153  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  41.5 
 
 		 661 aa  509  1e-143  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  56.28 
 
 		 450 aa  509  1e-143  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  41.5 
 
 		 661 aa  509  1e-143  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.13 
 
 		 666 aa  506  9.999999999999999e-143  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_4048  putative acyl-CoA carboxylase biotin-carrying subunit  44.87 
 
 		 670 aa  499  1e-140  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.139435  normal  0.287749 
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  43.71 
 
 		 665 aa  501  1e-140  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.434229 
 
 
-
 
NC_007958  RPD_0350  carbamoyl-phosphate synthase L chain, ATP-binding  45.1 
 
 		 679 aa  497  1e-139  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  hitchhiker  0.000448558 
 
 
-
 
NC_007958  RPD_2535  carbamoyl-phosphate synthase L chain, ATP-binding  45.17 
 
 		 671 aa  496  1e-139  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  56.22 
 
 		 450 aa  496  1e-139  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  46.03 
 
 		 643 aa  495  9.999999999999999e-139  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  54.79 
 
 		 480 aa  491  1e-137  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  44.97 
 
 		 673 aa  489  1e-137  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0018  biotin carboxylase  44.97 
 
 		 673 aa  487  1e-136  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_011694  PHATRDRAFT_51245  carboxylase propionyl-coa carboxylase  42.34 
 
 		 664 aa  487  1e-136  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B2811  acetyl-CoA carboxylase biotin carboxylase subunit  53.33 
 
 		 445 aa  486  1e-136  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000387379 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  44.36 
 
 		 662 aa  486  1e-136  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2512  acetyl-CoA carboxylase biotin carboxylase subunit  53.33 
 
 		 445 aa  485  1e-136  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_2549  acetyl-CoA carboxylase biotin carboxylase subunit  53.11 
 
 		 445 aa  483  1e-135  Bacillus cereus ATCC 10987  Bacteria  normal  0.569347  n/a   
 
 
-
 
NC_005945  BAS2370  acetyl-CoA carboxylase biotin carboxylase subunit  52.89 
 
 		 445 aa  483  1e-135  Bacillus anthracis str. Sterne  Bacteria  normal  0.17472  n/a   
 
 
-
 
NC_006368  lpp1792  hypothetical protein  40.56 
 
 		 654 aa  484  1e-135  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1793  hypothetical protein  40.59 
 
 		 654 aa  483  1e-135  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007530  GBAA_2548  acetyl-CoA carboxylase biotin carboxylase subunit  52.89 
 
 		 445 aa  483  1e-135  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A2604  acetyl-CoA carboxylase biotin carboxylase subunit  53.11 
 
 		 445 aa  483  1e-135  Bacillus cereus AH187  Bacteria  normal  0.189257  n/a   
 
 
-
 
NC_007778  RPB_2933  carbamoyl-phosphate synthase L chain, ATP-binding  43.61 
 
 		 671 aa  482  1e-135  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_2124  carbamoyl-phosphate synthase L chain, ATP-binding  45.24 
 
 		 666 aa  484  1e-135  Nitrobacter hamburgensis X14  Bacteria  normal  0.494302  n/a   
 
 
-
 
NC_009674  Bcer98_1803  acetyl-CoA carboxylase biotin carboxylase subunit  52.67 
 
 		 445 aa  482  1e-135  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.220445  n/a   
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  44.49 
 
 		 712 aa  481  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  59.91 
 
 		 667 aa  481  1e-134  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_2328  acetyl-CoA carboxylase biotin carboxylase subunit  52.89 
 
 		 445 aa  481  1e-134  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.611182  n/a   
 
 
-
 
NC_006274  BCZK2286  acetyl-CoA carboxylase biotin carboxylase subunit  52.89 
 
 		 445 aa  482  1e-134  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02415  methylcrotonyl-CoA carboxylase, alpha subunit  42.42 
 
 		 666 aa  481  1e-134  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2561  acetyl-CoA carboxylase biotin carboxylase subunit  52.67 
 
 		 445 aa  480  1e-134  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.5537800000000004e-18 
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  44.51 
 
 		 662 aa  482  1e-134  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_007925  RPC_2781  carbamoyl-phosphate synthase L chain, ATP-binding  43.24 
 
 		 667 aa  480  1e-134  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0940378  normal  0.476201 
 
 
-
 
NC_013061  Phep_3289  acetyl-CoA carboxylase, biotin carboxylase  53.62 
 
 		 496 aa  480  1e-134  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.191323 
 
 
-
 
NC_013730  Slin_3536  Carbamoyl-phosphate synthase L chain ATP- binding protein  51.69 
 
 		 517 aa  480  1e-134  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_2788  carbamoyl-phosphate synthase L chain ATP-binding  44.89 
 
 		 673 aa  481  1e-134  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.683073  normal  0.298513 
 
 
-
 
NC_010184  BcerKBAB4_2356  acetyl-CoA carboxylase biotin carboxylase subunit  52.44 
 
 		 445 aa  478  1e-133  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.488234  n/a   
 
 
-
 
NC_011004  Rpal_2809  Carbamoyl-phosphate synthase L chain ATP-binding  43.05 
 
 		 670 aa  478  1e-133  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.978814  n/a   
 
 
-
 
NC_012791  Vapar_0326  Carbamoyl-phosphate synthase L chain ATP-binding  43.59 
 
 		 649 aa  476  1e-133  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  43.42 
 
 		 652 aa  478  1e-133  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
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