| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0326 |
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| Symbol | |
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| ID | 7972675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 347610 |
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| End bp | 349559 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790929 |
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| Product | Carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_002942255 |
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| Protein GI | 239813345 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCG GCAAGATCCT CATCGCCAAC CGCGGCGAAA TTGCAGTGCG CGTGATGCGC
ACCGCGCGCG CCATGGGCTG CCGCACGGTC GCCGTGTATT CGAGCGCCGA TGCCGATGCG
GAGCACGTGC GGCAGGCCGA CCAGTCCGTG TGCATCGGCG AGCCGCTGCC CGCGCAGAGC
TACCTGGACA TCGCCGCGAT CGTCGAAGCC GCGCGTTCGA GCGGCGCGCA AGCGGTCCAT
CCCGGCTACG GCTTCCTCGC CGAGAACGCG GATTTCGCGC AAGCCTGCCG CGATGCGGGC
CTCGTCTTCG TCGGCCCCTC GCCAGAGGCC ATCCGCGCCA TGGGCGACAA GGCCGCAGCG
AAGCGGCTGA TGCAGGCTGC CGGCGTGCCC TGCATTCCCG GCTACCAGGG CGAAGACCAG
AGTGCGGCCA CGCTCGCTGC CGAAGCCGCG CGCATCGGCT GGCCCGTGAT GATCAAGGCC
ACGGCCGGCG GCGGCGGGCG CGGCATGCGG CTCGCGCCAT CGGCCGAGTC CTTTGCCGAG
CTGCTGCAGA GCGCGCAGTC CGAGGCGCTC CATGCCTTCG GCGATGCGAA CGTGATCCTG
GAGCTCGCCA TCGCCGCGCC GCGCCACATC GAGATCCAGG TGTTCGCCGA CCGGCACGGC
AACGCCATCC ACCTGGGTGA GCGCGACTGC TCGGTGCAGC GCCGGCACCA GAAGCTGATC
GAGGAATCGC CCTCGCCCGC CGTCTCCGAG GCCTTGCGCG AACGCATGGG CGCCACGGCC
GTGGCGGCCA CTAGGGCCAT CGGCTACGAA GGCGCGGGCA CGCTCGAATT CCTGCTCGAT
GCCGACGGGC AGTACTGGTT CATGGAGATG AACACGCGGC TGCAGGTGGA GCATCCGGTG
ACCGAGGCCG TGACAGGGCT CGACCTGGTC GAGCTGCAGC TGCGCGTGGC GGCGGGCGAG
GTGCTGCCGC TTGCACAGCA GGACGTGCGC CTGCGCGGCC ATGCGATCGA GGTGCGGCTG
TGTGCCGAAG ATCCGCGGCA GGGCTTCATG CCGCAAAGCG GCACGCTCGC CGCATGGCGG
CCTTCGCCGG CACTGCGCAT CGAGCATGCG CTGCGGGACG GCGCCGCAGT GCCGCCCTTC
TACGATTCGA TGATCGCCAA GCTCGTGGCC CATGGCCCAA CGCGCGAGGA AGCCAGGCGC
CGGCTGGTCG CGGGGCTGCA GGACACGGTG GCCCTGGGCC TGGCGACCAA CCAGCGCTTC
CTTCAGCGCG CGCTGACGCA TCCCGTGTTT GCCGGCGGTT CGGCGACGAC GGCGTTCATT
GCCGAACACG CCGACGCATT GCTGGCACCC GACCCCGCCA TGGCGCGCCG CACCGCATGG
CTCGCGGCGC TGCTGCTCCA GCTGGGCGAA CGCGGATGGC CCTCGCCGCT CGCGCACACG
CTGCCCAACG CGCTGCGCTT CTCGCTCGAC GGCCAGGTGC ACGCCGCCCG CGTGACGCCG
CGGGGCGCGG GCTGCTTCGA TATCGCGCTC GATGCGGCCG CGCCGGTACC GATCGAGCTG
CTTTCGCTGA CCGGCGATGG CGCCTTGCGC TTCTCCTGCG ATGGCGTCTC GGAGCGGGCC
TTGGCGGTGC GCGAATCCGC GACGCGCCTG TGGCTCCACT TCCATGGCCA GGCCTTCGAC
CTGCAGGACC TCACACATGC CGCCGTGCCG CGCGCCGAGG CCGCGGGCGG CGACGGCCTG
CTGCGCGCCT CGATGAACGG CCGCGTCATC GCGCTGCTGG TGGCCGAAGG CGAGGCCGTC
GCTGCCGGCC AGCCGATCGC CACGCTCGAG GCGATGAAGA TGGAACATGT GCACTGCGCG
CCGCGCGCGG GCCGCGTCGC CGCATTGCAT GTGGCGGTGG GTGCGCAGGT GGCCGCGCGC
CATGTGGTGG CCGAGATCGC CGACGCATGA
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| Protein sequence | MSFGKILIAN RGEIAVRVMR TARAMGCRTV AVYSSADADA EHVRQADQSV CIGEPLPAQS
YLDIAAIVEA ARSSGAQAVH PGYGFLAENA DFAQACRDAG LVFVGPSPEA IRAMGDKAAA
KRLMQAAGVP CIPGYQGEDQ SAATLAAEAA RIGWPVMIKA TAGGGGRGMR LAPSAESFAE
LLQSAQSEAL HAFGDANVIL ELAIAAPRHI EIQVFADRHG NAIHLGERDC SVQRRHQKLI
EESPSPAVSE ALRERMGATA VAATRAIGYE GAGTLEFLLD ADGQYWFMEM NTRLQVEHPV
TEAVTGLDLV ELQLRVAAGE VLPLAQQDVR LRGHAIEVRL CAEDPRQGFM PQSGTLAAWR
PSPALRIEHA LRDGAAVPPF YDSMIAKLVA HGPTREEARR RLVAGLQDTV ALGLATNQRF
LQRALTHPVF AGGSATTAFI AEHADALLAP DPAMARRTAW LAALLLQLGE RGWPSPLAHT
LPNALRFSLD GQVHAARVTP RGAGCFDIAL DAAAPVPIEL LSLTGDGALR FSCDGVSERA
LAVRESATRL WLHFHGQAFD LQDLTHAAVP RAEAAGGDGL LRASMNGRVI ALLVAEGEAV
AAGQPIATLE AMKMEHVHCA PRAGRVAALH VAVGAQVAAR HVVAEIADA
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