Gene Rsph17025_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2302 
Symbol 
ID5083721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2343200 
End bp2345200 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content67% 
IMG OID640483865 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_001168496 
Protein GI146278337 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA AGATCCTGAT CGCGAACCGG GGCGAGATCG CCTGCCGCGT CATCAAGACC 
GCCCGCAAGA TGGGCATCAA GACGGTGGCC GTCTATTCGG ACGCCGACCG CAACGCTCTC
CACGTCAGCA TGGCGGACGA GGCGATCCAC ATCGGGCCGC CGCCCGCCAA CCAGTCCTAC
ATCGTGATCG ACAAGATCAT GGAGGCGATC AAGGCGTCGG GCGCCGAGGC CGTGCATCCG
GGCTACGGCT TCCTGTCCGA GCGGATGGAC TTCGCCGCCG CGCTGGAGAA GGCCGGTGTC
GTCTTCATCG GCCCGCCGTC TCCGGCGATC GAGGCGATGG GCGACAAGAT CACCTCGAAG
AAGCTGGCGA AGGAGGCCGG CGTCTCGACG GTGCCGGGCT ACATGGGCCT CATTGCCGAC
GCCGACGAGG CGGTGAAGAT CTCGGACGAG ATCGGCTATC CGGTGATGAT CAAGGCCAGC
GCCGGCGGCG GCGGCAAGGG GATGCGGATC GCCTGGAACG CTCAGGAAGC GCGCGAAGGC
TTTGAATCCT CGAAGAACGA GGCCGCCAAC AGCTTCGGCG ACGACCGGAT CTTCATCGAG
AAGTTCGTGA CGCAACCGCG CCACATCGAG ATCCAGGTGC TGGCCGACAA GCACGGCAAC
TGCGTCTACC TGCACGAGCG CGAGTGCTCG ATCCAGCGCC GGAACCAGAA GGTCATCGAG
GAGGCGCCCT CGCCGTTCCT GGATGAGGCC ACCCGCAAGG CGATGGGCGA ACAGGCCGTC
GCGCTGGCCA AGGCCGTGGG CTATGCCTCG GCCGGGACGG TGGAGTTCAT CGTGGACGGG
CAGAAGAACT TCTACTTCCT CGAGATGAAC ACCCGGCTGC AGGTCGAGCA TCCGGTCACC
GAGCTGATCA CCGGCATCGA CCTCGTCGAG CAGATGATCC GGGTGGCGGC GGGCGAGAAG
CTGCCCTTCC AGCAGTCGGA CCTGAAGATC AACGGCTGGG CGATGGAAAG CCGGCTTTAT
GCCGAAGATC CCTATCGCAA CTTCCTGCCC TCGATCGGTC GCCTGACCCG CTACCGCCCG
CCGGTGGAAG CGGTCACGCC CACCTCGGTC GTCCGGAACG ACACCGGCGT CTTCGAGGGC
GGCGAGATCT CGATGTATTA CGACCCGATG ATCGCCAAGC TCTGCACCTG GGCGCCGACG
CGGGACGCGG CGATCGAGGA GATGCGTCTG GCGCTCGACA CGTTCGAGGT TGAGGGGATC
GGCCACAACC TGCCCTTCGT GGGCGCGGTC ATGGACCATC CGCGCTTCGT GAGTGGCGAC
ATCACCACCG CCTTCATCGC CGAGGAATAT CCCGAAGGCT TCCAGGGGGC GACCCTGGAT
GAGCCGACGC TGCGCCGGGT GGCGGCGGCC GCCGCCGCGA TGAACCGCGT GGCCGAGATC
CGTCGCACCC GCATCTCGGG CACGATGGAC AACCACGAGC GGACGGTGGG CGACGACTGG
GTGGTGTCGC TGCAGGGCGA GGACTTCCGC GTCGGCATCG CCGCCGACCG CGAAGGCTCC
ACCGTGACCT TCTGCGATGG CTCGTCGCTG CGCTGCACCT CGGACTGGAC GCCGGGCCAG
CCGCTCGCCC GCGTGATGGT GGACGGCAAG CCGCTGGTGA TGAAGGTCGG CAAGATCCCG
ATGGGCTTCC GGGTGCGCCT GCGCGGCGCG GACCTGAAGG TGCATGTCCG CACCCCGCGT
CAGGCGGAAC TCGCGGTCCT CATGCCCGAG AAGCTGCCGC CGGACACCTC ACGCTTCCTG
CTCTGCCCGA TGCCGGGTCT GGTGGTGAAG ATCAACGTCG CGGAAGGCGA CGAGGTGCAG
GAGGGCCAGG CGCTCGCCAC CGTCGAGGCC ATGAAGATGG AGAACATCCT GCGCGCCGAG
CGCAAGGGTG TGGTCAAGCG CATCTCCGCC GCCCCCGGAT CGAGCCTGCG CGTGGACGAC
ATCATCATGG AGTTCGAATG A
 
Protein sequence
MFKKILIANR GEIACRVIKT ARKMGIKTVA VYSDADRNAL HVSMADEAIH IGPPPANQSY 
IVIDKIMEAI KASGAEAVHP GYGFLSERMD FAAALEKAGV VFIGPPSPAI EAMGDKITSK
KLAKEAGVST VPGYMGLIAD ADEAVKISDE IGYPVMIKAS AGGGGKGMRI AWNAQEAREG
FESSKNEAAN SFGDDRIFIE KFVTQPRHIE IQVLADKHGN CVYLHERECS IQRRNQKVIE
EAPSPFLDEA TRKAMGEQAV ALAKAVGYAS AGTVEFIVDG QKNFYFLEMN TRLQVEHPVT
ELITGIDLVE QMIRVAAGEK LPFQQSDLKI NGWAMESRLY AEDPYRNFLP SIGRLTRYRP
PVEAVTPTSV VRNDTGVFEG GEISMYYDPM IAKLCTWAPT RDAAIEEMRL ALDTFEVEGI
GHNLPFVGAV MDHPRFVSGD ITTAFIAEEY PEGFQGATLD EPTLRRVAAA AAAMNRVAEI
RRTRISGTMD NHERTVGDDW VVSLQGEDFR VGIAADREGS TVTFCDGSSL RCTSDWTPGQ
PLARVMVDGK PLVMKVGKIP MGFRVRLRGA DLKVHVRTPR QAELAVLMPE KLPPDTSRFL
LCPMPGLVVK INVAEGDEVQ EGQALATVEA MKMENILRAE RKGVVKRISA APGSSLRVDD
IIMEFE