| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2815 |
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| Symbol | |
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| ID | 3964266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3115573 |
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| End bp | 3117537 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637917634 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_524058 |
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| Protein GI | 89901587 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.102576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCT CAAAGATTCT GATTGCCAAT CGCGGCGAGA TCGCTTGTCG CGTGATTCGA
ACCGCGCGTA ACTTGGGTTA TCGAACCGTT GCTGTCTACA GTGATGCTGA CCAGGCGGCG
CCGCACGTCC GTCTGGCCGA TGAAGCGGTC CACATCGGGG GCTCTGCGGC AGCCGATTCC
TACCTGCGGG TGGAGGTTTT GCTGCAAGCC GCGCGCAAGA CCGGTGCCGA TGCCATTCAT
CCCGGTTACG GATTCCTGAG CGAAAACGCG GGCTTTGCCC AGGCCTGCCT GGATGCTGGA
CTCGTTTTCA TTGGGCCGCC TCCGAGTGCC ATTGAGGCGA TGGGTGACAA GGCGCTGGCC
AAGCGTCGCA TGATCGCCGC CGGTGTGCCC TGCGCGCCAG GTTATCTGGG TGAAGAGCAG
GACGACGCGC GACTGACTGA GGAAGCGTTG AAACTCGGTT TCCCGCTGCT GGTCAAGGCG
GTGGCGGGTG GTGGTGGTCG TGGTATGCGC CTGGTGCGTG AGGCTGGCGA AATTAAACAG
GCCATTGTGG CTGCCCGGCG TGAGGCGCAA AGTGCCTTTG GCGATGGCAC CTTGATGCTG
GAACGCTTGA TCGACAACGG TCGGCATATT GAAATCCAGG TGTTTGCCGA CGCGCACGGC
CATGCCGTGT ACCTGGGCGA GCGCGACTGC ACAGCCCAGC GCAGAAGGCA GAAAGTGATC
GAGGAAGCGC CGTCGCCCGT CGTTAATGCG GCGCTGCGCG AGTCCATGGG CAAGGATGCT
GTTGCGGCAG CACTGGCCGT GGGTTACCGC GGGGCGGGCA CGGTGGAGTT CATCGTTGAT
GCCGACCTCA AGCACTATTT CCTGGAAATG AACACCCGTT TGCAGGTCGA GCACCCGGTG
ACCGAGCTGG TGACGGGGTT TGATCTGGTG GAGTGGCAAC TGCTGGTGGC AGCCGGTCAG
CCCCTGCCGG CAATTCAGGC CGACATCAAA CTGACGGGCC ATGCGATGGA AGCGCGCCTG
TATGTGGAAG ACCCGTATGC CGGCTTTGCG CCACAAACCG GAACGGTGCG CTGGTGGCGT
CCCCAGCAAG CCCTGTTGGC CGGGGTGCGC ATTGACGACG GCATCGAAGA GGGCAGTGAA
ATTTCTCCCT ATTACGACGC CATGGTGGCC AAGGTCATCG TGCATGGGCG TGACCGCAAT
GAGGCGATCC GCCGCTTGCG CGCCGCCCTG GAGAACGCGC CCCTGCTCGG GCTGCGCAAC
AACGGTCGTT TTCTGTCTGA TCTGGTGAAC CATCCGGCAT TCCGTGCCGC GGCGATGACC
ACCACCCTGA TCGACCAGTG GCAGGAGGCG GGTGAGGCGC TGCTGCAGCG TCCGCTGCCG
GGCGACGAAG CCTGGTGCGT TGTGGCAGCA AGCTTGGCCA TGCAAAACGG CGCCAACTGG
CGTGCCGACA GTGTGGCGGC CTTTGATATG CCTTTGCGCT GCGATGAGCT CACGCAAACG
CTTCGGGTTC ACCCGGACCG GTCGGGGCAG GTGGCGGTCA CTTTGGGAGG CCAAAAGCAT
CTGGTGCGGA TCATCGACTT CAAGGATGGC AAGCTGCGCT TCGAGATCGA TGGCGTGACG
CGAACCGCGG TGGCGGTCAA GCATCAGCAG GAATTGCACA TCGCGTTGGG AGGCGCCTCT
TTTGTCTTCC ATGAAGTTTC GCCATTTCCA GGCAAAGACG CGGCGCTGGA CGCCACCCGG
GCGCTATCCC CTGTGGCCGG CAAGGTCACG CAAATTCAAT TTGCGGTCGG TGAGGGCGTC
AAAGAGGGGC AGGCCCTGGT CTGCGTTGAA GCCATGAAGA TGGAAATGTG GCTGACGGCA
CAGGCCGCCG GCACGGTGGT GGCCTTGCAC GTGAAAGTTG GCGAGCAGGT CGAATCGGGT
GCCTTGCTGA TCGAAATTGA ACTGGAAGAC GAAAAGGAAA CATGA
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| Protein sequence | MSFSKILIAN RGEIACRVIR TARNLGYRTV AVYSDADQAA PHVRLADEAV HIGGSAAADS
YLRVEVLLQA ARKTGADAIH PGYGFLSENA GFAQACLDAG LVFIGPPPSA IEAMGDKALA
KRRMIAAGVP CAPGYLGEEQ DDARLTEEAL KLGFPLLVKA VAGGGGRGMR LVREAGEIKQ
AIVAARREAQ SAFGDGTLML ERLIDNGRHI EIQVFADAHG HAVYLGERDC TAQRRRQKVI
EEAPSPVVNA ALRESMGKDA VAAALAVGYR GAGTVEFIVD ADLKHYFLEM NTRLQVEHPV
TELVTGFDLV EWQLLVAAGQ PLPAIQADIK LTGHAMEARL YVEDPYAGFA PQTGTVRWWR
PQQALLAGVR IDDGIEEGSE ISPYYDAMVA KVIVHGRDRN EAIRRLRAAL ENAPLLGLRN
NGRFLSDLVN HPAFRAAAMT TTLIDQWQEA GEALLQRPLP GDEAWCVVAA SLAMQNGANW
RADSVAAFDM PLRCDELTQT LRVHPDRSGQ VAVTLGGQKH LVRIIDFKDG KLRFEIDGVT
RTAVAVKHQQ ELHIALGGAS FVFHEVSPFP GKDAALDATR ALSPVAGKVT QIQFAVGEGV
KEGQALVCVE AMKMEMWLTA QAAGTVVALH VKVGEQVESG ALLIEIELED EKET
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