More than 300 homologs were found in PanDaTox collection
for query gene Phep_0203 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013061  Phep_0203  response regulator receiver  100 
 
 		 231 aa  471  1e-132  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.359659 
 
 
-
 
NC_013037  Dfer_3651  two component transcriptional regulator, winged helix family  53.68 
 
 		 228 aa  253  2.0000000000000002e-66  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.0435949 
 
 
-
 
NC_013730  Slin_5387  two component transcriptional regulator, winged helix family  51.87 
 
 		 236 aa  245  4.9999999999999997e-64  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_09498  two-component system, transcriptional regulatory protein  51.74 
 
 		 236 aa  236  2e-61  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013162  Coch_0209  two component transcriptional regulator, winged helix family  51.08 
 
 		 251 aa  233  2.0000000000000002e-60  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_3460  two component transcriptional regulator  52.17 
 
 		 238 aa  229  3e-59  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0108229  n/a   
 
 
-
 
NC_002950  PG1089  DNA-binding response regulator RprY  50 
 
 		 245 aa  229  4e-59  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.414682 
 
 
-
 
NC_013037  Dfer_5352  two component transcriptional regulator, winged helix family  46.96 
 
 		 224 aa  227  1e-58  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_1246  two component transcriptional regulator, winged helix family  52.19 
 
 		 233 aa  223  2e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.877806  normal  1 
 
 
-
 
NC_013132  Cpin_0693  two component transcriptional regulator, winged helix family  44.1 
 
 		 229 aa  221  6e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_3566  two component transcriptional regulator, winged helix family  47.14 
 
 		 228 aa  217  1e-55  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.720677 
 
 
-
 
NC_013132  Cpin_1242  two component transcriptional regulator, winged helix family  46.96 
 
 		 234 aa  213  1.9999999999999998e-54  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_0856  two component transcriptional regulator, winged helix family  46.26 
 
 		 233 aa  212  3.9999999999999995e-54  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_2742  two component transcriptional regulator, winged helix family  43.61 
 
 		 230 aa  208  6e-53  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.142828  normal  1 
 
 
-
 
NC_009441  Fjoh_4521  two component transcriptional regulator  44.44 
 
 		 230 aa  199  1.9999999999999998e-50  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4970  two component transcriptional regulator  42.54 
 
 		 228 aa  199  3.9999999999999996e-50  Flavobacterium johnsoniae UW101  Bacteria  normal  0.375881  n/a   
 
 
-
 
NC_013132  Cpin_1649  two component transcriptional regulator, winged helix family  42.36 
 
 		 236 aa  198  5e-50  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_4089  two component transcriptional regulator, winged helix family  41.85 
 
 		 230 aa  189  2.9999999999999997e-47  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  hitchhiker  0.00519658 
 
 
-
 
NC_013132  Cpin_0255  two component transcriptional regulator, winged helix family  41.74 
 
 		 232 aa  187  1e-46  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_7053  two component transcriptional regulator, winged helix family  41.48 
 
 		 248 aa  184  1.0000000000000001e-45  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00262574  normal  1 
 
 
-
 
NC_014230  CA2559_03275  two-component system, transcriptional regulatory protein  39.13 
 
 		 234 aa  174  7e-43  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_0346  two component transcriptional regulator, winged helix family  37 
 
 		 234 aa  154  2e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013223  Dret_1848  two component transcriptional regulator, winged helix family  36.09 
 
 		 236 aa  152  5e-36  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.0065624  normal  1 
 
 
-
 
NC_013061  Phep_3446  response regulator receiver  40.17 
 
 		 234 aa  151  1e-35  Pedobacter heparinus DSM 2366  Bacteria  normal  0.664648  normal  1 
 
 
-
 
NC_013132  Cpin_0673  two component transcriptional regulator, winged helix family  40.79 
 
 		 235 aa  149  3e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.996485  normal  1 
 
 
-
 
NC_011830  Dhaf_2159  two component transcriptional regulator, winged helix family  37.99 
 
 		 227 aa  145  4.0000000000000006e-34  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00177162  n/a   
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  37.28 
 
 		 225 aa  145  7.0000000000000006e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2168  two component transcriptional regulator, winged helix family  35.81 
 
 		 247 aa  142  4e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.222815 
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  35.81 
 
 		 245 aa  141  8e-33  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0926269 
 
 
-
 
NC_011658  BCAH187_A4663  DNA-binding response regulator  37.83 
 
 		 230 aa  140  9.999999999999999e-33  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0590  DNA-binding response regulator  37.83 
 
 		 230 aa  141  9.999999999999999e-33  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_0421  two component transcriptional regulator  36.24 
 
 		 245 aa  141  9.999999999999999e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0518956  normal  1 
 
 
-
 
NC_003909  BCE_4662  DNA-binding response regulator  37.72 
 
 		 230 aa  140  1.9999999999999998e-32  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4272  response regulator  37.83 
 
 		 230 aa  140  1.9999999999999998e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.760233  n/a   
 
 
-
 
NC_011773  BCAH820_4650  DNA-binding response regulator  37.83 
 
 		 230 aa  140  1.9999999999999998e-32  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_013515  Smon_0737  two component transcriptional regulator, winged helix family  40.29 
 
 		 224 aa  140  1.9999999999999998e-32  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009565  TBFG_11051  two component system transcriptional regulator trcR  36.4 
 
 		 257 aa  140  1.9999999999999998e-32  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_4365  two component transcriptional regulator  37.55 
 
 		 230 aa  139  3e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  37.17 
 
 		 233 aa  139  3e-32  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_005945  BAS4433  DNA-binding response regulator  37.83 
 
 		 230 aa  139  3.9999999999999997e-32  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4283  response regulator  37.83 
 
 		 230 aa  139  3.9999999999999997e-32  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4777  DNA-binding response regulator  37.83 
 
 		 230 aa  139  3.9999999999999997e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A4647  DNA-binding response regulator  37.39 
 
 		 230 aa  139  3.9999999999999997e-32  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6507  two component transcriptional regulator  36.24 
 
 		 270 aa  138  6e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0763131  normal  0.20607 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  36.24 
 
 		 236 aa  137  1e-31  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  35.81 
 
 		 242 aa  137  1e-31  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_008528  OEOE_1773  DNA-binding response regulator  32.17 
 
 		 224 aa  137  1e-31  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  35.22 
 
 		 247 aa  137  2e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  35.37 
 
 		 242 aa  137  2e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.559477 
 
 
-
 
NC_011726  PCC8801_2302  two component transcriptional regulator, winged helix family  36.09 
 
 		 243 aa  137  2e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009380  Strop_3686  response regulator receiver  36.28 
 
 		 233 aa  137  2e-31  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_2353  two component transcriptional regulator, winged helix family  36.09 
 
 		 243 aa  137  2e-31  Cyanothece sp. PCC 8802  Bacteria  normal  0.0794558  normal  1 
 
 
-
 
NC_013440  Hoch_4665  two component transcriptional regulator, winged helix family  36.36 
 
 		 235 aa  137  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.880727  normal  0.209776 
 
 
-
 
NC_011884  Cyan7425_1115  two component transcriptional regulator, winged helix family  35.37 
 
 		 243 aa  136  3.0000000000000003e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.0950226  normal  1 
 
 
-
 
NC_004347  SO_4388  DNA-binding response regulator  36.4 
 
 		 227 aa  135  4e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_4916  response regulator receiver protein  33.04 
 
 		 233 aa  135  4e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  36.12 
 
 		 227 aa  135  4e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_005945  BAS4745  DNA-binding response regulator  36.52 
 
 		 232 aa  135  5e-31  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_4963  DNA-binding response regulator  36.52 
 
 		 232 aa  135  5e-31  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005957  BT9727_4583  DNA-binding response regulator  36.52 
 
 		 232 aa  135  5e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.510578  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  36.48 
 
 		 227 aa  135  5e-31  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_007530  GBAA_5106  DNA-binding response regulator  36.52 
 
 		 232 aa  135  5e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  34.78 
 
 		 226 aa  135  7.000000000000001e-31  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013165  Shel_11290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.19 
 
 		 234 aa  135  7.000000000000001e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_2514  two component transcriptional regulator, winged helix family  36.84 
 
 		 226 aa  134  9.999999999999999e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.24701  n/a   
 
 
-
 
NC_009675  Anae109_4159  two component transcriptional regulator  32.61 
 
 		 230 aa  134  9.999999999999999e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.667277  normal  0.0359145 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  34.35 
 
 		 229 aa  134  9.999999999999999e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_011830  Dhaf_3593  two component transcriptional regulator, winged helix family  36.09 
 
 		 226 aa  134  9.999999999999999e-31  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000142937  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  36.36 
 
 		 239 aa  134  1.9999999999999998e-30  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  36.36 
 
 		 239 aa  134  1.9999999999999998e-30  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009513  Lreu_1228  two component transcriptional regulator  34.8 
 
 		 228 aa  133  1.9999999999999998e-30  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000325236  n/a   
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  35.37 
 
 		 243 aa  134  1.9999999999999998e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.0817018 
 
 
-
 
NC_009012  Cthe_3069  two component transcriptional regulator  33.91 
 
 		 230 aa  133  1.9999999999999998e-30  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000000467461  n/a   
 
 
-
 
NC_009921  Franean1_6588  two component transcriptional regulator  34.51 
 
 		 229 aa  133  1.9999999999999998e-30  Frankia sp. EAN1pec  Bacteria  normal  0.13217  normal  1 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  37.33 
 
 		 230 aa  133  3e-30  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1861  two component transcriptional regulator  36.91 
 
 		 225 aa  133  3e-30  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000248634  n/a   
 
 
-
 
NC_013530  Xcel_2937  two component transcriptional regulator, winged helix family  34.95 
 
 		 243 aa  132  3.9999999999999996e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4605  DNA-binding response regulator  35.65 
 
 		 232 aa  132  3.9999999999999996e-30  Bacillus cereus E33L  Bacteria  decreased coverage  0.000000523811  n/a   
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  36.8 
 
 		 225 aa  132  3.9999999999999996e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_013947  Snas_5144  two component transcriptional regulator, winged helix family  35.56 
 
 		 236 aa  132  3.9999999999999996e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.204078  normal  0.858106 
 
 
-
 
NC_013595  Sros_6397  response regulator receiver protein  34.78 
 
 		 237 aa  132  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.680662  normal  0.0804167 
 
 
-
 
NC_009953  Sare_0219  two component transcriptional regulator  33.77 
 
 		 237 aa  132  5e-30  Salinispora arenicola CNS-205  Bacteria  normal  0.127265  hitchhiker  0.00333518 
 
 
-
 
NC_008146  Mmcs_0165  two component transcriptional regulator  34.93 
 
 		 243 aa  132  5e-30  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_0956  DNA-binding response regulator  33.92 
 
 		 223 aa  132  5e-30  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.504019  n/a   
 
 
-
 
NC_008705  Mkms_0174  two component transcriptional regulator  34.93 
 
 		 243 aa  132  5e-30  Mycobacterium sp. KMS  Bacteria  normal  0.947413  normal  1 
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  36.06 
 
 		 236 aa  132  6e-30  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  36.73 
 
 		 236 aa  132  6e-30  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0155  two component transcriptional regulator  34.93 
 
 		 243 aa  132  6e-30  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0636837 
 
 
-
 
NC_003909  BCE_2749  transcription response regulator-like protein  36.44 
 
 		 221 aa  132  6.999999999999999e-30  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00061025  n/a   
 
 
-
 
NC_014165  Tbis_3276  winged helix family two component transcriptional regulator  33.33 
 
 		 234 aa  131  6.999999999999999e-30  Thermobispora bispora DSM 43833  Bacteria  normal  0.208422  normal  0.192837 
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.91 
 
 		 226 aa  131  6.999999999999999e-30  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  0.132847 
 
 
-
 
NC_011725  BCB4264_A4980  DNA-binding response regulator  36.09 
 
 		 232 aa  131  7.999999999999999e-30  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1402  two component transcriptional regulator, winged helix family  31.44 
 
 		 241 aa  131  7.999999999999999e-30  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.154165 
 
 
-
 
NC_013517  Sterm_2324  two component transcriptional regulator, winged helix family  37.86 
 
 		 223 aa  131  7.999999999999999e-30  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.237639  n/a   
 
 
-
 
NC_009674  Bcer98_3233  two component transcriptional regulator  36.36 
 
 		 230 aa  131  7.999999999999999e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_1827  two component transcriptional regulator, winged helix family  36.12 
 
 		 227 aa  131  7.999999999999999e-30  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_0461  two component transcriptional regulator  34.06 
 
 		 248 aa  131  7.999999999999999e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.735267  normal  0.697364 
 
 
-
 
NC_014212  Mesil_2988  two component transcriptional regulator, winged helix family  32.64 
 
 		 256 aa  131  7.999999999999999e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  35.4 
 
 		 237 aa  131  7.999999999999999e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_3061  two component transcriptional regulator  34.36 
 
 		 229 aa  131  1.0000000000000001e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.296421  normal  1 
 
 
-
 
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