| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2742 |
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| Symbol | |
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| ID | 8358903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3362653 |
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| End bp | 3363345 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964922 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003122422 |
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| Protein GI | 256421769 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.142828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTATA AGCTATTATA TGTAGAAGAC GAGCCATTTC TGTCACGCAT TGTCAGTGAT
GGCTTAAAAG CAAGCGGCTA TGAAGTACAC CTGATTACCG ACGGAAAGAA AGCTTTGTCC
GCATTTGAAA CCATTCAGCC CGATATCTGT GTGCTGGATA TCATGCTACC ATCCAAGGAT
GGCTACACGA TTGCAGAAGA GATCCGGCTG TTAGACCACC AGGTGCCGAT CATCTTCCTG
AGTGCAAAAT CACTGACAGA AGATGTGGTG AAAGGGTTTA AGACAGGCGG GAATGACTAC
CTTAAGAAAC CCTTCAGTAT GGAGGAACTG CTGGTGCGTA TAGAAGCCTT ACTATATCGT
TTCTCGGGCG CCCCGCAACA GCAACCAGCC GGGAAGGAAA CACTGTATCA TTTTGGAACC
TGTACCCTGG ATACGGTGCA GCAGACATTA GTGACCTCCA GCGGAAAGCA TACCTTATCC
TTTAAAGAAT CAGCTTTGCT GGAAATGCTG ATTCGCCGCA AAAACGATAT CCTGGAAAGA
CAGGAAGCCC TGTTAAAGAT CTGGAATGAC GACAGCTACT ATAATACGCG CAGTATGGAC
GTATTCATGA CACATATACG TAAACTGCTG AAAGATGAAC CGGGCATCCA GATCCTTAGT
ATCAGAGGTG TGGGCTATAA ACTGATATGT TAA
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| Protein sequence | MSYKLLYVED EPFLSRIVSD GLKASGYEVH LITDGKKALS AFETIQPDIC VLDIMLPSKD
GYTIAEEIRL LDHQVPIIFL SAKSLTEDVV KGFKTGGNDY LKKPFSMEEL LVRIEALLYR
FSGAPQQQPA GKETLYHFGT CTLDTVQQTL VTSSGKHTLS FKESALLEML IRRKNDILER
QEALLKIWND DSYYNTRSMD VFMTHIRKLL KDEPGIQILS IRGVGYKLIC
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