| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3566 |
|---|
| Symbol | |
|---|
| ID | 8227151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4359779 |
|---|
| End bp | 4360465 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644931401 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003087939 |
|---|
| Protein GI | 255037318 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.720677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA GAATCCTGTA CGTCGAAGAT GACCCTAATC TCGCATTTGC CACCAAAGAC
AATCTCGAAC AATATGATTA TGAAGTAGTT CATGCTACGG ACGGTGCGGA AGCGCTCGAC
TTTTTCGGCA AGGAACACTT CGACATTTGC GTGCTCGACA TTATGCTGCC TAGAATGGAC
GGCTTCACAT TGGCCGAGAA AATCCGCGCT TCCGACAGCC AGGTGCCCAT TCTCTTCCTC
TCGGCCCGTT CCATGCAGGA TGATAAGATC AAAGGCCTCA AACTCGGCGC CGACGATTAC
ATTACCAAGC CATTCAGTAT CGAAGAGCTG AAATTGCGGA TCGACGTGTT CCTCCGCCGC
AGCAAAGCAG ATTCGATTTT AGTGGTCAAG CCGGGCAGTA AGCAGATCGG CAAATACGTT
TTTGATTTCC AAAAGCTGAC GCTCACCCTC GACGGCAAGT CGCAAAGCCT CACCTTCCGC
GAGGCAGAAG TGCTCAAATT CATGGCCGAA CGTACCGATC AGGTGATTCG GCGGGACGAG
CTTTTGAAGG CGATTTGGGG CGACGACGAC TATTTTATGG GCCGCAGTCT GGATGTTTTC
ATTTCCAGAT TGCGCAAATA TCTGTCCGGC GATCCCGACA TTCGCATTGA TAACGTGCAC
GGCGTAGGAT TCAGGATGAG ATGGTGA
|
|---|
| Protein sequence | MKKRILYVED DPNLAFATKD NLEQYDYEVV HATDGAEALD FFGKEHFDIC VLDIMLPRMD
GFTLAEKIRA SDSQVPILFL SARSMQDDKI KGLKLGADDY ITKPFSIEEL KLRIDVFLRR
SKADSILVVK PGSKQIGKYV FDFQKLTLTL DGKSQSLTFR EAEVLKFMAE RTDQVIRRDE
LLKAIWGDDD YFMGRSLDVF ISRLRKYLSG DPDIRIDNVH GVGFRMRW
|
|---|
| |