| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1246 |
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| Symbol | |
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| ID | 8357362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1491465 |
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| End bp | 1492166 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963402 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003120945 |
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| Protein GI | 256420292 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.877806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAGC GTAAGCCAAA AATATTGCTG GCAGAAGATG ATACCAACCT GGGTATGGTA
CTGAAGAATT ATCTCGAACT GAATGACTAC GACGTAGAAC TGTGCCGTGA TGGTATACTC
GCGCTGGCAG CGTTCAGACG CGAGAAATTT GACATCTGCC TGCTGGACAT CATGATGCCT
AATATGGATG GTTTTAAACT GGCAGAAGAG ATCCGCGACG TTGATCCGGA TATTCCTTTG
TTCTTCCTGT CTGCCAAGAC AATGAAAGAA GATGTGATCC ATGGCTACAA ACTGGGCGCT
GATGATTACA TCACCAAACC TTTTGACAGT GAACTGTTGC TGCTCAAAAT CAAAGCGATC
CTTAAACGTA ACCAGGAACT GAACAGCAAA GAAGAAGAAC AGCACGAGTT CCGCATCGGT
CGTTATGCAT TCAATGCACG CCTGCGTACA CTCACCAGAG ACGGCGATTC ACACACTTTA
TCTCCTAAGG AGAACGAACT GCTGCGTATG CTGTGCGAAC ATAAAAACGA CCTGCTGCCA
AGAGAGCTGG CCCTGAAAAA GATCTGGGGC AGCGATACTT ATTTCAACGG CCGCAGTATG
GACGTTTATA TCGCTAAACT GCGTAAATAC CTGAAGGAAG ACCCGGATAT CGAGATCGTC
AATATCCATG GTAATGGTTT CCGCCTGGTA GTAAAGGACT GA
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| Protein sequence | MEERKPKILL AEDDTNLGMV LKNYLELNDY DVELCRDGIL ALAAFRREKF DICLLDIMMP
NMDGFKLAEE IRDVDPDIPL FFLSAKTMKE DVIHGYKLGA DDYITKPFDS ELLLLKIKAI
LKRNQELNSK EEEQHEFRIG RYAFNARLRT LTRDGDSHTL SPKENELLRM LCEHKNDLLP
RELALKKIWG SDTYFNGRSM DVYIAKLRKY LKEDPDIEIV NIHGNGFRLV VKD
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