Gene Sare_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0219 
Symbol 
ID5706123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp250663 
End bp251376 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID641269748 
Producttwo component transcriptional regulator 
Protein accessionYP_001535145 
Protein GI159035892 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00333518 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCTCAT GCCGAACCCG TGTCCTCGTC GTCGACGACG AGGACAACAT CCGCGCCCTG 
CTGTCGGCCA CCCTGCGCCT GATCGAATTC GACGTACGGA CCGCGGCGAG CGGTCAGGAG
GCACTGGCCT TGGCGGCAGA GTTCGACCCG GATCTGGTGG TCCTCGACGT GATGCTGCCC
GACCTCGACG GATTCCAGGT GGCCCAGCGG CTACGTGACG TGAGGGTCGG CGTGCCGGTG
CTGTTCCTGA CGGCCCGCAG CGCGGTGGAG GACCGGATCT CCGGGCTGAC CGCCGGCGCC
GACGACTACG TGAGCAAGCC GTTCAGCCTG GAGGAGGTGG TACTGCGGAT CCGCGCCATC
CTGCGGCGCA GCCAGGTCGA GCCCTACCCC GGTGCGGACT CGGGCGTGCT CCGCTACGCC
GATCTCCAGC TCGATGAGGA CGCCCACGAG GTACGCCGGG CCGACCGGGT GATCGACTTG
TCGCCGACGG AGTTCAAGCT GTTGCGCTAC CTGATGGTCA ACGCCGGCCG GGTGGTCAGC
AAGGCGCAGA TCCTCGACCG GGTCTGGAAC TACGACTTCG GCGGCGACGG GCGGATCGTC
GAGTCCTACG TCTACTACCT GCGCAAGAAG GTGGACAGCC GGGCACCCGC CCTGATCCAC
ACCATCCGGG GAGTGGGCTA CACACTTCGG GTGCCGCGCA CCGGGGAGCG GTGA
 
Protein sequence
MSSCRTRVLV VDDEDNIRAL LSATLRLIEF DVRTAASGQE ALALAAEFDP DLVVLDVMLP 
DLDGFQVAQR LRDVRVGVPV LFLTARSAVE DRISGLTAGA DDYVSKPFSL EEVVLRIRAI
LRRSQVEPYP GADSGVLRYA DLQLDEDAHE VRRADRVIDL SPTEFKLLRY LMVNAGRVVS
KAQILDRVWN YDFGGDGRIV ESYVYYLRKK VDSRAPALIH TIRGVGYTLR VPRTGER