Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0219 |
Symbol | |
ID | 5706123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 250663 |
End bp | 251376 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269748 |
Product | two component transcriptional regulator |
Protein accession | YP_001535145 |
Protein GI | 159035892 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.127265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00333518 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCTCAT GCCGAACCCG TGTCCTCGTC GTCGACGACG AGGACAACAT CCGCGCCCTG CTGTCGGCCA CCCTGCGCCT GATCGAATTC GACGTACGGA CCGCGGCGAG CGGTCAGGAG GCACTGGCCT TGGCGGCAGA GTTCGACCCG GATCTGGTGG TCCTCGACGT GATGCTGCCC GACCTCGACG GATTCCAGGT GGCCCAGCGG CTACGTGACG TGAGGGTCGG CGTGCCGGTG CTGTTCCTGA CGGCCCGCAG CGCGGTGGAG GACCGGATCT CCGGGCTGAC CGCCGGCGCC GACGACTACG TGAGCAAGCC GTTCAGCCTG GAGGAGGTGG TACTGCGGAT CCGCGCCATC CTGCGGCGCA GCCAGGTCGA GCCCTACCCC GGTGCGGACT CGGGCGTGCT CCGCTACGCC GATCTCCAGC TCGATGAGGA CGCCCACGAG GTACGCCGGG CCGACCGGGT GATCGACTTG TCGCCGACGG AGTTCAAGCT GTTGCGCTAC CTGATGGTCA ACGCCGGCCG GGTGGTCAGC AAGGCGCAGA TCCTCGACCG GGTCTGGAAC TACGACTTCG GCGGCGACGG GCGGATCGTC GAGTCCTACG TCTACTACCT GCGCAAGAAG GTGGACAGCC GGGCACCCGC CCTGATCCAC ACCATCCGGG GAGTGGGCTA CACACTTCGG GTGCCGCGCA CCGGGGAGCG GTGA
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Protein sequence | MSSCRTRVLV VDDEDNIRAL LSATLRLIEF DVRTAASGQE ALALAAEFDP DLVVLDVMLP DLDGFQVAQR LRDVRVGVPV LFLTARSAVE DRISGLTAGA DDYVSKPFSL EEVVLRIRAI LRRSQVEPYP GADSGVLRYA DLQLDEDAHE VRRADRVIDL SPTEFKLLRY LMVNAGRVVS KAQILDRVWN YDFGGDGRIV ESYVYYLRKK VDSRAPALIH TIRGVGYTLR VPRTGER
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