| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1861 |
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| Symbol | |
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| ID | 5743150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2290142 |
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| End bp | 2290819 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641292958 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001558969 |
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| Protein GI | 160880001 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000248634 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTCAGA TATTGGTCGT AGAAGACGAT AAAAATACGG CTAGGTTAAT GAAAGCAGTT
CTAATGCATG CAGGATATGA GGTTTTTTGT GCAGACAATG GGGTTAGCGC GTTAGAATTG
ATGGATAAAC AACATATTGA CTTAATTGTT CTTGATGTTA TGATGCCAGA GATGGATGGA
TATGAATTTA CGAAGCAATT ACGCGGTAGT AATGACAATA CACCAATTCT CATGGTAACA
GCGAAACAAT TGCCGGAAGA TAAATGCAAA GGCTTTCTTG CGGGTACAGA TGATTATATG
GTGAAGCCTG TTAATGAAGA TGAAATGTTG CTTCGTATCA AAGCTTTACT TCGTCGTGCT
AAGATTGTAA ATGAGCACAA GCTACACATT GGCAAAGTAA CCTTAGATTA TGATGCTTTG
ACCGTTTCAA AAGATGGGGA GAGTCAAACC CTACCACAAA AAGAATTTTA TTTGCTGTAT
AAGCTATTGT CCTATCCTGA TAGAATATTT ACTCGAATAC AATTGATGGA CGAGATATGG
GGGATGGAGT CTGAGACAGT CGATACTACG GTAAATGTGC ATATTAACCG ATTGAGAAAA
CGTTTTGAAG GTTATTCTGA ATTTGATATT ATAGCAATCC GAGGGATTGG ATATAAGGCG
GTGAAGAATT GTGAATAA
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| Protein sequence | MFQILVVEDD KNTARLMKAV LMHAGYEVFC ADNGVSALEL MDKQHIDLIV LDVMMPEMDG
YEFTKQLRGS NDNTPILMVT AKQLPEDKCK GFLAGTDDYM VKPVNEDEML LRIKALLRRA
KIVNEHKLHI GKVTLDYDAL TVSKDGESQT LPQKEFYLLY KLLSYPDRIF TRIQLMDEIW
GMESETVDTT VNVHINRLRK RFEGYSEFDI IAIRGIGYKA VKNCE
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