Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5144 |
Symbol | |
ID | 8886352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5469245 |
End bp | 5469955 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003513872 |
Protein GI | 291302594 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.204078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.858106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTAA CGGAAGAAGA TCGGGAGGGC GAGGCGACGC TGCTGGTCGT CGAGGATGAT CCGAACATCT GTGAGCTGCT GGCCACGAGC CTGGGGTACG CGGGGTTCAC CGTTCACCGG GCCGAGGGCG GCGAGGAGGC GGTGCGCGCG GTGGCGCGGC ACCGCCCGGA CCTGGTCGTG CTGGATGTGA TGCTGCCCGA CTTCGACGGT TTCGAGGTGG CGCGCCGGAT CCGGTCCGGC TCGGATCGGA CGCCCATTGT GTACTTGACG GCGCGGGACG CCCTCGAGGA CAAGGTGCGC GGCCTGACGC TGGGCGGGGA CGACTACGTG ACCAAGCCGT TCAGTCTCGA AGAGGTGATC GCGCGGATCC GCGCGGTGCT GCGGCGCAGC AAGGGGGACG CGCCGCCACC ACCGCGGTTG CAGTACGCCG ACCTGGAGCT GGACGAGGAG ACCCACGAGG TCTGGCGGGG CGGCAACTCG GTGCAGCTGT CGCCCACGGA GTTCAAGCTG CTGCGGTACT TCATGGTCAA CGCGGGCCGG GTGCTGTCCA AGGCACAGAT CCTGGACCAC GTGTGGCGCT ACGACTTTCG GGGAGATGAC GGCATTGTGG AGTCCTATGT GTCGTATTTG AGGCGCAAGA TCGACAACAC CGAGCCGCGG CTGATCCAGA CGCTGCGCGG CATCGGCTAC GTGCTGAGAA CACCGTCGTG A
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Protein sequence | MAVTEEDREG EATLLVVEDD PNICELLATS LGYAGFTVHR AEGGEEAVRA VARHRPDLVV LDVMLPDFDG FEVARRIRSG SDRTPIVYLT ARDALEDKVR GLTLGGDDYV TKPFSLEEVI ARIRAVLRRS KGDAPPPPRL QYADLELDEE THEVWRGGNS VQLSPTEFKL LRYFMVNAGR VLSKAQILDH VWRYDFRGDD GIVESYVSYL RRKIDNTEPR LIQTLRGIGY VLRTPS
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