Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5352 |
Symbol | |
ID | 8228963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6468570 |
End bp | 6469244 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644933197 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003089710 |
Protein GI | 255039089 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACGG TATTATTCAT CGAGGACGAA CCAGCGCTGG GCATGATCGT GAAAGACAGC CTCACTTACA GGGGCTTTGA AGTGCTGTAT GCTGCCAACG GAGTCGAAGG GCTGGAACAA TTCCGGCTGC ACCGGCCCGA CATCGTCGTA GCCGACATTA TGATGCCCGA TATGGACGGC TTCACCATGG CCGAGCATAT CCGCCGAGAC GATCCGCACG TTCCGATCAT GTTCCTCACG GCCCGCTCGC AAACCGCCGA CGTGGTGCGC GGCTTCGAGC TGGGCGGGAA CGATTACCTC AAAAAGCCAT TCAGCCTCGA AGAGCTCATT GTGCGCATTA ATGCCCTCCT GCGTGCCGGT GCGCACCGCA GTACCGGCAA CGGAACATTC AAAATCGGGC GGTATTCGTT CGATCCGGCC AAGCAAAGGC TCTCATTGGA CGGCCGGGAA ATTGCCTTGT CGCACCGCGA AGCCGAACTC CTGCGCCGAC TTTACCTGCA ACGCAACGAG GTGCTCGGCC GCAGCGAAGT GCTCATGGAA CTCTGGGGCG ACGATTCCTT CTTCAACGGA CGCAGTCTCG ACGTATTCAT CACCAAACTC CGCCGTCACC TGCGGGAAGA TCCTAAAATC CAGATTATCA ATATCCGAGG CAGAGGTTAC AAGCTGGTAC TTTGA
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Protein sequence | MATVLFIEDE PALGMIVKDS LTYRGFEVLY AANGVEGLEQ FRLHRPDIVV ADIMMPDMDG FTMAEHIRRD DPHVPIMFLT ARSQTADVVR GFELGGNDYL KKPFSLEELI VRINALLRAG AHRSTGNGTF KIGRYSFDPA KQRLSLDGRE IALSHREAEL LRRLYLQRNE VLGRSEVLME LWGDDSFFNG RSLDVFITKL RRHLREDPKI QIINIRGRGY KLVL
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