Gene Cagg_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2168 
Symbol 
ID7266741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2660828 
End bp2661571 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content55% 
IMG OID643566999 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002463487 
Protein GI219849054 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.222815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATGC CACTCTTCCA TCGTACAACT CAGCGTGCTG TCGATCAGCC GCCGCCAAAA 
CGCCGGATTT TGGTGGCCGA TGACGATCCC TCGATTGGTC GTCTGATCCA GACAGCATTA
CCGGCTCAGC AATACGAGAC GGTTGTGGTC GCTAATGGGA TGGAAGCGCT CGAAGCGTTC
GATCGCGGAC AATTCGATCT GGTCTTTCTC GACGTGATGA TGCCGTTCGT TGATGGATTT
GACGCTTGCG AGCGAATCCG CGCCAAGAGT GATGTGCCGA TTGTTATTAT CACTGCCCGC
GATGGCACCG ATGATATTGT ACAGGGATTC CGGCGTGGCG CCGATGAGTA TATCACGAAG
CCATTTCGCG TGGCCGAGTT TGTGGCGCGC GTCGAAGCGA TTTTACGTCG TGTTGATATG
CAAAAGGCGC GGACTGCGCC GCCGTTGGTG CATGTCGGTG ATCTCGTCAT TGATGCGACC
GCGCATAAGG TGTCGGTGCG CGGCGCCGAA GTCAAACTGA CACCGATGGA GTTTGAGTTA
CTCTATTTTC TCGCCGCAAA TGCCGGACAG GTCTTTACCC GTGAGGTGCT GTTCCGTGAA
GTTTGGGGCT ACGAATACAT CGGGGAAACG AATCTGGTCG ATGTGTGTGT CCGCCGGTTG
CGCGAAAAGG TTGAAGTCGA ACCATCAAAG CCCAAGATCA TTGTCACCGT CCGTGGAGTT
GGGTATAAGC TTGAACGCGC GTAG
 
Protein sequence
MPMPLFHRTT QRAVDQPPPK RRILVADDDP SIGRLIQTAL PAQQYETVVV ANGMEALEAF 
DRGQFDLVFL DVMMPFVDGF DACERIRAKS DVPIVIITAR DGTDDIVQGF RRGADEYITK
PFRVAEFVAR VEAILRRVDM QKARTAPPLV HVGDLVIDAT AHKVSVRGAE VKLTPMEFEL
LYFLAANAGQ VFTREVLFRE VWGYEYIGET NLVDVCVRRL REKVEVEPSK PKIIVTVRGV
GYKLERA