More than 300 homologs were found in PanDaTox collection
for query gene PXO_00916 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00916  methyl-accepting chemotaxis protein  100 
 
 
548 aa  1123    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.234107  n/a   
 
 
-
 
NC_011138  MADE_01222  methyl-accepting chemotaxis protein  33.65 
 
 
580 aa  160  6e-38  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566871  n/a   
 
 
-
 
NC_011893  Mnod_8793  hypothetical protein  35.61 
 
 
173 aa  90.9  6e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.369764  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  64.47 
 
 
217 aa  90.5  7e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  28.53 
 
 
658 aa  90.5  8e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_010581  Bind_2123  hypothetical protein  33.33 
 
 
173 aa  89.4  1e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.97009  normal 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  64.18 
 
 
212 aa  84.7  0.000000000000004  Caulobacter sp. K31  Bacteria  normal  normal  0.881689 
 
 
-
 
NC_012917  PC1_3437  methyl-accepting chemotaxis sensory transducer  27.41 
 
 
646 aa  83.6  0.00000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.143807  n/a   
 
 
-
 
NC_007796  Mhun_2669  methyl-accepting chemotaxis sensory transducer  24.38 
 
 
808 aa  82.4  0.00000000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013421  Pecwa_3594  methyl-accepting chemotaxis sensory transducer  27.8 
 
 
646 aa  81.6  0.00000000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  26.15 
 
 
658 aa  80.1  0.0000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  26.4 
 
 
658 aa  79.7  0.0000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1412  methyl-accepting chemotaxis sensory transducer  25.45 
 
 
808 aa  79.3  0.0000000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.961328  normal  0.598579 
 
 
-
 
NC_010501  PputW619_0210  methyl-accepting chemotaxis sensory transducer  27.36 
 
 
632 aa  77.8  0.0000000000005  Pseudomonas putida W619  Bacteria  normal  0.248487  normal  0.150257 
 
 
-
 
NC_009654  Mmwyl1_1385  methyl-accepting chemotaxis sensory transducer  28.16 
 
 
683 aa  77  0.0000000000009  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0792  methyl-accepting chemotaxis sensory transducer  25.45 
 
 
651 aa  76.3  0.000000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1310  methyl-accepting chemotaxis sensory transducer  25.37 
 
 
667 aa  76.3  0.000000000001  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0033  methyl-accepting chemotaxis sensory transducer  24.57 
 
 
651 aa  75.5  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.250878  n/a   
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  56.92 
 
 
213 aa  76.3  0.000000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal 
 
 
-
 
NC_011891  A2cp1_0045  methyl-accepting chemotaxis sensory transducer  24.32 
 
 
651 aa  75.1  0.000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3114  methyl-accepting chemotaxis sensory transducer  24.25 
 
 
667 aa  75.1  0.000000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2637  methyl-accepting chemotaxis sensory transducer  25.65 
 
 
667 aa  75.1  0.000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  0.0295827  n/a   
 
 
-
 
NC_007760  Adeh_0030  methyl-accepting chemotaxis sensory transducer  24.19 
 
 
651 aa  74.3  0.000000000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  28.77 
 
 
646 aa  74.3  0.000000000005  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_009901  Spea_1322  methyl-accepting chemotaxis sensory transducer  24.2 
 
 
667 aa  73.6  0.000000000008  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  23.84 
 
 
700 aa  73.2  0.00000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.484624  normal  0.151355 
 
 
-
 
NC_009051  Memar_0239  methyl-accepting chemotaxis sensory transducer  25.62 
 
 
793 aa  73.2  0.00000000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009052  Sbal_2976  methyl-accepting chemotaxis sensory transducer  26.74 
 
 
667 aa  72.8  0.00000000001  Shewanella baltica OS155  Bacteria  hitchhiker  0.000241408  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  24.76 
 
 
674 aa  72.8  0.00000000001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3134  methyl-accepting chemotaxis sensory transducer  26.37 
 
 
667 aa  72.8  0.00000000001  Shewanella baltica OS195  Bacteria  normal  0.0135223  normal  0.80442 
 
 
-
 
NC_007796  Mhun_2944  methyl-accepting chemotaxis sensory transducer  24.17 
 
 
806 aa  72.4  0.00000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.0288682  normal  0.27333 
 
 
-
 
NC_011663  Sbal223_1387  methyl-accepting chemotaxis sensory transducer  26.37 
 
 
667 aa  72.4  0.00000000002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2990  methyl-accepting chemotaxis sensory transducer  26.37 
 
 
667 aa  72.4  0.00000000002  Shewanella baltica OS185  Bacteria  normal  0.413203  n/a   
 
 
-
 
NC_010552  BamMC406_4192  methyl-accepting chemotaxis sensory transducer  42.73 
 
 
660 aa  70.5  0.00000000007  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0520721  normal  0.510764 
 
 
-
 
NC_008391  Bamb_3714  methyl-accepting chemotaxis sensory transducer  42.73 
 
 
660 aa  70.9  0.00000000007  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  24.28 
 
 
674 aa  70.5  0.00000000007  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  39.64 
 
 
661 aa  69.7  0.0000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.45 
 
 
226 aa  68.9  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  40.37 
 
 
226 aa  68.9  0.0000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
662 aa  68.9  0.0000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  26.67 
 
 
643 aa  68.9  0.0000000002  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  46.75 
 
 
230 aa  68.9  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  44.57 
 
 
212 aa  68.2  0.0000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
662 aa  68.6  0.0000000003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  30.15 
 
 
680 aa  67.8  0.0000000004  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_010506  Swoo_1568  methyl-accepting chemotaxis sensory transducer  24.28 
 
 
667 aa  67.8  0.0000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  36.7 
 
 
659 aa  67.8  0.0000000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  47.76 
 
 
215 aa  67.4  0.0000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0495  methyl-accepting chemotaxis sensory transducer  25 
 
 
795 aa  66.2  0.000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.132321  normal 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  39.78 
 
 
214 aa  66.6  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4070  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
660 aa  66.2  0.000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4296  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
660 aa  66.2  0.000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  38.95 
 
 
213 aa  66.6  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3221  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
660 aa  66.2  0.000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.229974 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
656 aa  65.9  0.000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1684  methyl-accepting chemotaxis protein I  34.82 
 
 
676 aa  65.1  0.000000003  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  55.22 
 
 
209 aa  64.7  0.000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  26.97 
 
 
656 aa  64.3  0.000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
533 aa  64.3  0.000000006  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  44.16 
 
 
213 aa  64.3  0.000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_008345  Sfri_1146  methyl-accepting chemotaxis sensory transducer  25.31 
 
 
668 aa  63.9  0.000000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.970933  n/a   
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  44.93 
 
 
213 aa  63.2  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  44.78 
 
 
667 aa  63.2  0.00000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  52.31 
 
 
210 aa  63.2  0.00000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_007435  BURPS1710b_A2308  methyl-accepting chemotaxis protein II  43.08 
 
 
684 aa  63.5  0.00000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  39.47 
 
 
232 aa  63.5  0.00000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  38.05 
 
 
212 aa  62.8  0.00000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0507  methyl-accepting chemotaxis protein  43.08 
 
 
630 aa  63.2  0.00000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0140  putative methyl-accepting chemotaxis protein  43.08 
 
 
684 aa  63.5  0.00000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0610174  n/a   
 
 
-
 
NC_009075  BURPS668_A1080  methyl-accepting chemotaxis protein  43.08 
 
 
687 aa  63.5  0.00000001  Burkholderia pseudomallei 668  Bacteria  normal  0.469209  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0994  methyl-accepting chemotaxis protein  43.08 
 
 
678 aa  63.5  0.00000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.799426  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  38.71 
 
 
209 aa  62.8  0.00000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  44.09 
 
 
212 aa  62.4  0.00000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1243  methyl-accepting chemotaxis sensory transducer  25.37 
 
 
667 aa  62.4  0.00000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1313  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
667 aa  62  0.00000002  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00146838  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  43.21 
 
 
223 aa  62.8  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  42.86 
 
 
241 aa  62.4  0.00000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  35.65 
 
 
222 aa  62.4  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2345  putative methyl-accepting chemotaxis sensory transducer  21.63 
 
 
666 aa  62.4  0.00000002  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.60686 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  41.11 
 
 
225 aa  62.8  0.00000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  35.85 
 
 
232 aa  62  0.00000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_007952  Bxe_B2939  methyl-accepting chemotaxis sensory transducer  27.24 
 
 
672 aa  62  0.00000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  41.41 
 
 
218 aa  62  0.00000003  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  46.75 
 
 
209 aa  62  0.00000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  38.46 
 
 
225 aa  62  0.00000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  44.74 
 
 
221 aa  62  0.00000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_010676  Bphyt_6894  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
657 aa  61.2  0.00000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.068141  normal  0.373533 
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  23.92 
 
 
740 aa  61.2  0.00000005  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  40.79 
 
 
219 aa  60.8  0.00000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  40 
 
 
217 aa  61.2  0.00000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  35.4 
 
 
211 aa  60.8  0.00000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  46.05 
 
 
209 aa  60.8  0.00000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  33.33 
 
 
216 aa  60.8  0.00000007  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  41.56 
 
 
220 aa  60.5  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  44.87 
 
 
207 aa  60.5  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  42.11 
 
 
234 aa  60.5  0.00000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_008577  Shewana3_1293  methyl-accepting chemotaxis sensory transducer  24.63 
 
 
667 aa  60.5  0.00000008  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3828  methyl-accepting chemotaxis sensory transducer  44.62 
 
 
506 aa  60.5  0.00000008  Acidovorax citrulli AAC00-1  Bacteria  normal  0.188818  normal 
 
 
-
 
NC_013456  VEA_002906  methyl-accepting chemotaxis protein  40 
 
 
678 aa  60.5  0.00000008  Vibrio sp. Ex25  Bacteria  normal  0.816112  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.87 
 
 
225 aa  60.5  0.00000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
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