More than 300 homologs were found in PanDaTox collection
for query gene Gobs_0155 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_0155  two component transcriptional regulator, LuxR family  100 
 
 
242 aa  463  1e-129  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.527048  n/a   
 
 
-
 
NC_013757  Gobs_0707  two component transcriptional regulator, LuxR family  45.66 
 
 
270 aa  151  8e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0156  two component transcriptional regulator, LuxR family  44.39 
 
 
230 aa  133  1.9999999999999998e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.379873  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  38.03 
 
 
234 aa  126  4.0000000000000003e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.43 
 
 
216 aa  125  5e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  38.64 
 
 
228 aa  125  7e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  38.53 
 
 
224 aa  122  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  38.43 
 
 
220 aa  122  6e-27  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  37.04 
 
 
219 aa  121  9.999999999999999e-27  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  33.64 
 
 
216 aa  119  3.9999999999999996e-26  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  35.85 
 
 
219 aa  118  7.999999999999999e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  35.85 
 
 
219 aa  118  7.999999999999999e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  38.57 
 
 
206 aa  117  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  41.59 
 
 
219 aa  117  1.9999999999999998e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  36.74 
 
 
219 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  37.5 
 
 
227 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  38.81 
 
 
218 aa  116  3.9999999999999997e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  36.07 
 
 
250 aa  116  3.9999999999999997e-25  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.02 
 
 
216 aa  115  5e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  41.51 
 
 
220 aa  115  5e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  35.19 
 
 
231 aa  115  6e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  38.99 
 
 
225 aa  115  6e-25  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  39.07 
 
 
217 aa  115  6.9999999999999995e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.5 
 
 
239 aa  115  6.9999999999999995e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  33.8 
 
 
212 aa  114  1.0000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  34.76 
 
 
236 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  37.61 
 
 
223 aa  113  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  35.81 
 
 
219 aa  113  2.0000000000000002e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  38.74 
 
 
221 aa  113  3e-24  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  40.76 
 
 
209 aa  113  3e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  38.71 
 
 
241 aa  113  3e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  34.96 
 
 
242 aa  112  4.0000000000000004e-24  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  36.56 
 
 
230 aa  112  4.0000000000000004e-24  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  37.79 
 
 
225 aa  112  4.0000000000000004e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  38.36 
 
 
214 aa  112  5e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  35.47 
 
 
238 aa  111  8.000000000000001e-24  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  36.94 
 
 
232 aa  111  9e-24  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  35.94 
 
 
223 aa  110  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  38.65 
 
 
214 aa  111  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  37.32 
 
 
215 aa  111  1.0000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  32.58 
 
 
217 aa  111  1.0000000000000001e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  38.76 
 
 
226 aa  110  1.0000000000000001e-23  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  32.08 
 
 
236 aa  110  2.0000000000000002e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  36.89 
 
 
229 aa  110  2.0000000000000002e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  38.68 
 
 
219 aa  110  2.0000000000000002e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  35.9 
 
 
225 aa  110  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  39.17 
 
 
230 aa  110  2.0000000000000002e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  35.98 
 
 
235 aa  109  3e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  37.5 
 
 
219 aa  110  3e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  35.96 
 
 
210 aa  110  3e-23  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  38.07 
 
 
223 aa  110  3e-23  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  37.38 
 
 
232 aa  109  3e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  36.41 
 
 
220 aa  109  4.0000000000000004e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  32.56 
 
 
226 aa  108  5e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  36.44 
 
 
222 aa  109  5e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  39.91 
 
 
212 aa  108  5e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  35.98 
 
 
207 aa  108  5e-23  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  40.57 
 
 
217 aa  109  5e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  35.85 
 
 
220 aa  108  6e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.33 
 
 
214 aa  108  6e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  35.65 
 
 
220 aa  108  6e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  38.14 
 
 
234 aa  108  8.000000000000001e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  35.81 
 
 
215 aa  108  8.000000000000001e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  40.09 
 
 
223 aa  108  8.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  33.94 
 
 
215 aa  108  8.000000000000001e-23  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  41.46 
 
 
211 aa  108  8.000000000000001e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  33.94 
 
 
215 aa  108  8.000000000000001e-23  Mycobacterium sp. JLS  Bacteria  normal  normal  0.171113 
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  33.94 
 
 
220 aa  108  9.000000000000001e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  35.05 
 
 
224 aa  108  9.000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  35.51 
 
 
221 aa  108  9.000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  35.48 
 
 
208 aa  108  9.000000000000001e-23  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  34.93 
 
 
222 aa  108  9.000000000000001e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  35 
 
 
232 aa  108  1e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  36.78 
 
 
239 aa  107  1e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  38.5 
 
 
230 aa  107  1e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  33.33 
 
 
242 aa  107  1e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  35.09 
 
 
225 aa  107  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  37.67 
 
 
227 aa  107  2e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013172  Bfae_05830  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.36 
 
 
238 aa  107  2e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  0.388223  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  34.96 
 
 
243 aa  107  2e-22  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  33.33 
 
 
219 aa  107  2e-22  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  39.63 
 
 
225 aa  107  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  32.86 
 
 
242 aa  107  2e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  36.36 
 
 
217 aa  107  2e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  35.84 
 
 
249 aa  107  2e-22  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  36.14 
 
 
209 aa  106  3e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  37.79 
 
 
225 aa  106  3e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  39.56 
 
 
229 aa  106  3e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_006274  BCZK1321  response regulator  32.86 
 
 
210 aa  106  3e-22  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  37.33 
 
 
218 aa  106  3e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  32.39 
 
 
209 aa  106  3e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  32.69 
 
 
217 aa  106  3e-22  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  34.12 
 
 
211 aa  106  3e-22  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  36.77 
 
 
216 aa  107  3e-22  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_014210  Ndas_4688  two component transcriptional regulator, LuxR family  35.62 
 
 
252 aa  106  3e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.898869  normal 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  39.61 
 
 
222 aa  106  4e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  37.44 
 
 
220 aa  106  4e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  37.74 
 
 
220 aa  106  4e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  33.8 
 
 
216 aa  105  4e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  33.05 
 
 
254 aa  105  4e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
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