| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4688 |
|---|
| Symbol | |
|---|
| ID | 9248570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5561502 |
|---|
| End bp | 5562260 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003682580 |
|---|
| Protein GI | 297563606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.898869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACC CCGGGTTCCC CCGCCCCCAC ACCCCGGAGG TTTCGCACGA AAAGGGGACA
GGTCCACTGA TTACCCGCGT ACTGATTATC GGTGACCAGG ACGTAGTGAG GCTGGGACTG
TGTACGGCCT TCGAAGCGAC ACAAGACATC AAGGTGGTCG GAACGACCGG CGACCTGCGA
GTGGCGGTGG CCAGGGCGCG GCAGCTCCGT CCCGACGTGG CCGTCGTCGA CATGGCGGCG
CTGGGGGAGA GGGGGAACGA GGTGGTCCGC GAGCTCTCGG AGCTGGACGA CCCCCGCGTT
CGCGTCCTCG CCCTGGCGGT GCCCAGCGAC AGGGACAACC TCGTCAGCTG CCTGCGGGCC
GGCGCCTGCG GCTACATCCT CACCGGAAGC GACATGTCCG TCATCACCGA CGCCGTGCGC
TCGCTCCGGG AGGGGCACAC CGTGCTCGAC CCGGCCGTGG TCGGCACGGT CGTGGAGGAG
TTCGTCCGCT ACGAGGCGGC GGTGTGCGTC GGGGCGGACG ACCCGGACTC GTGCTGGAAG
GAGCAGTTCA CCGACCGCGA GAAGGACGTG GTCGCGCTGG TCGCCACCGG CGCCAGCAAC
GCGGAGATCG CCGGGGTCCT CGGCCTCTCC GAGACGACCA TCAAGTCACA CGTGTCCAGC
GTCCTCGCCA AGCGGGGGCT GCGCAACCGC GTCCAGCTGG TGGTCTGGGC CTTCCGGAGC
GGGCTCGTCC CGGTCCGTGG CAGGGACGCG GTGCTCTAA
|
|---|
| Protein sequence | MDNPGFPRPH TPEVSHEKGT GPLITRVLII GDQDVVRLGL CTAFEATQDI KVVGTTGDLR
VAVARARQLR PDVAVVDMAA LGERGNEVVR ELSELDDPRV RVLALAVPSD RDNLVSCLRA
GACGYILTGS DMSVITDAVR SLREGHTVLD PAVVGTVVEE FVRYEAAVCV GADDPDSCWK
EQFTDREKDV VALVATGASN AEIAGVLGLS ETTIKSHVSS VLAKRGLRNR VQLVVWAFRS
GLVPVRGRDA VL
|
|---|
| |