More than 300 homologs were found in PanDaTox collection
for query gene Fjoh_3887 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_3887  short-chain dehydrogenase/reductase SDR  100 
 
 
326 aa  671    Flavobacterium johnsoniae UW101  Bacteria  normal  0.248139  n/a   
 
 
-
 
NC_002947  PP_3972  short chain dehydrogenase  40.69 
 
 
441 aa  237  2e-61  Pseudomonas putida KT2440  Bacteria  normal  normal  0.155927 
 
 
-
 
NC_010501  PputW619_2604  short chain dehydrogenase  41.07 
 
 
441 aa  235  1.0000000000000001e-60  Pseudomonas putida W619  Bacteria  normal  normal  0.155527 
 
 
-
 
NC_010322  PputGB1_2986  short chain dehydrogenase  47.68 
 
 
441 aa  231  1e-59  Pseudomonas putida GB-1  Bacteria  normal  0.889744  normal  0.40482 
 
 
-
 
NC_009512  Pput_2427  short chain dehydrogenase  47.62 
 
 
442 aa  229  5e-59  Pseudomonas putida F1  Bacteria  normal  0.15313  normal  0.413243 
 
 
-
 
NC_012858  Rleg_6867  short chain dehydrogenase  37.82 
 
 
333 aa  221  9.999999999999999e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5897  short chain dehydrogenase  44.44 
 
 
328 aa  213  2.9999999999999995e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  35.4 
 
 
327 aa  212  5.999999999999999e-54  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_009620  Smed_4061  short chain dehydrogenase  47.32 
 
 
337 aa  208  9e-53  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0149  short-chain dehydrogenase/reductase SDR  35.6 
 
 
326 aa  208  1e-52  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  39.4 
 
 
299 aa  206  4e-52  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  39.74 
 
 
332 aa  206  6e-52  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  40.17 
 
 
330 aa  204  2e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  33.33 
 
 
544 aa  203  4e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  39.3 
 
 
330 aa  202  5e-51  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_012853  Rleg_5776  short-chain dehydrogenase/reductase SDR  35.14 
 
 
335 aa  198  9e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.171589  normal 
 
 
-
 
NC_009439  Pmen_2360  short chain dehydrogenase  46.4 
 
 
327 aa  190  2.9999999999999997e-47  Pseudomonas mendocina ymp  Bacteria  normal  0.113129  hitchhiker  0.00199253 
 
 
-
 
NC_011992  Dtpsy_3318  short-chain dehydrogenase/reductase SDR  44.24 
 
 
334 aa  189  7e-47  Acidovorax ebreus TPSY  Bacteria  normal  0.496064  n/a   
 
 
-
 
NC_008782  Ajs_3968  short-chain dehydrogenase/reductase SDR  44.24 
 
 
334 aa  188  1e-46  Acidovorax sp. JS42  Bacteria  normal  normal  0.223195 
 
 
-
 
NC_011894  Mnod_0481  short-chain dehydrogenase/reductase SDR  34.16 
 
 
328 aa  185  1.0000000000000001e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4611  short-chain dehydrogenase/reductase SDR  36.96 
 
 
356 aa  181  1e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.824493 
 
 
-
 
NC_008781  Pnap_3988  short-chain dehydrogenase/reductase SDR  41.63 
 
 
404 aa  180  2.9999999999999997e-44  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.326194 
 
 
-
 
NC_012560  Avin_20190  Short-chain dehydrogenase/reductase SDR  33.85 
 
 
336 aa  177  2e-43  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1361  short-chain dehydrogenase/reductase SDR  36.77 
 
 
334 aa  177  3e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0134131 
 
 
-
 
NC_011365  Gdia_2859  short-chain dehydrogenase/reductase SDR  40.27 
 
 
293 aa  176  6e-43  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.725607  normal  0.816114 
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  35.45 
 
 
293 aa  152  8.999999999999999e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  39.78 
 
 
277 aa  144  2e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_013037  Dfer_0510  short-chain dehydrogenase/reductase SDR  33.86 
 
 
355 aa  142  9e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.453841  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  35.78 
 
 
261 aa  138  1e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  34.9 
 
 
267 aa  134  1.9999999999999998e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_010557  BamMC406_6386  short chain dehydrogenase  30.66 
 
 
342 aa  131  1.0000000000000001e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.875817  normal  0.430331 
 
 
-
 
NC_008392  Bamb_5638  short chain dehydrogenase  30.66 
 
 
342 aa  131  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.731163  normal  0.168256 
 
 
-
 
NC_010087  Bmul_5454  short chain dehydrogenase  30.29 
 
 
342 aa  129  6e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00420602 
 
 
-
 
NC_013235  Namu_0343  short-chain dehydrogenase/reductase SDR  29.37 
 
 
314 aa  127  3e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0579  short chain dehydrogenase  29.93 
 
 
336 aa  124  2e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0423  short-chain dehydrogenase/reductase SDR  30.36 
 
 
291 aa  123  4e-27  Mycobacterium sp. MCS  Bacteria  normal  0.389698  n/a   
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  28.01 
 
 
339 aa  123  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008705  Mkms_0433  short-chain dehydrogenase/reductase SDR  30.36 
 
 
291 aa  123  4e-27  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0648553 
 
 
-
 
NC_009077  Mjls_0410  short-chain dehydrogenase/reductase SDR  30.36 
 
 
291 aa  123  4e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.526015 
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
239 aa  121  9.999999999999999e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
239 aa  121  9.999999999999999e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
239 aa  121  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
239 aa  121  9.999999999999999e-27  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  40.76 
 
 
239 aa  122  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
239 aa  121  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
242 aa  121  1.9999999999999998e-26  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
242 aa  121  1.9999999999999998e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
242 aa  121  1.9999999999999998e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
242 aa  121  1.9999999999999998e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  40.22 
 
 
242 aa  121  1.9999999999999998e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_3507  short-chain dehydrogenase/reductase SDR  32.02 
 
 
355 aa  120  3.9999999999999996e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3200  short-chain dehydrogenase/reductase SDR  32.62 
 
 
341 aa  120  3.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  31.33 
 
 
236 aa  118  9.999999999999999e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  35.68 
 
 
238 aa  117  1.9999999999999998e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_007348  Reut_B5078  short chain dehydrogenase  30.97 
 
 
337 aa  118  1.9999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6050  short chain dehydrogenase  29.2 
 
 
342 aa  118  1.9999999999999998e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.057993 
 
 
-
 
NC_008544  Bcen2424_6458  short chain dehydrogenase  29.2 
 
 
342 aa  117  1.9999999999999998e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  0.859122  normal 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  35.2 
 
 
252 aa  117  3e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1371  short chain dehydrogenase  29.2 
 
 
342 aa  117  3.9999999999999997e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.103888  n/a   
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  28.68 
 
 
332 aa  115  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1374  short chain dehydrogenase  28.92 
 
 
343 aa  115  1.0000000000000001e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  0.271507  n/a   
 
 
-
 
NC_010725  Mpop_0161  short-chain dehydrogenase/reductase SDR  30.93 
 
 
333 aa  115  1.0000000000000001e-24  Methylobacterium populi BJ001  Bacteria  normal  0.264514  normal 
 
 
-
 
NC_009078  BURPS1106A_A3026  short chain dehydrogenase  28.92 
 
 
343 aa  115  1.0000000000000001e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  0.327343  n/a   
 
 
-
 
NC_009075  BURPS668_A3155  short chain dehydrogenase  28.92 
 
 
343 aa  115  1.0000000000000001e-24  Burkholderia pseudomallei 668  Bacteria  normal  0.652853  n/a   
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  36.63 
 
 
317 aa  114  3e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5635  short-chain dehydrogenase/reductase SDR  30.47 
 
 
247 aa  113  4.0000000000000004e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  29.37 
 
 
336 aa  113  6e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_006349  BMAA1975  short chain dehydrogenase  28.57 
 
 
343 aa  112  1.0000000000000001e-23  Burkholderia mallei ATCC 23344  Bacteria  normal  0.509548  n/a   
 
 
-
 
NC_009079  BMA10247_A2259  short chain dehydrogenase  28.57 
 
 
343 aa  112  1.0000000000000001e-23  Burkholderia mallei NCTC 10247  Bacteria  normal  0.153923  n/a   
 
 
-
 
NC_011729  PCC7424_5076  short chain dehydrogenase  28.82 
 
 
339 aa  112  1.0000000000000001e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.5503 
 
 
-
 
NC_008784  BMASAVP1_0996  short chain dehydrogenase  28.57 
 
 
343 aa  112  1.0000000000000001e-23  Burkholderia mallei SAVP1  Bacteria  normal  0.663659  n/a   
 
 
-
 
NC_008835  BMA10229_1284  short chain dehydrogenase  28.57 
 
 
343 aa  112  1.0000000000000001e-23  Burkholderia mallei NCTC 10229  Bacteria  normal  0.524856  n/a   
 
 
-
 
NC_009439  Pmen_4578  short-chain dehydrogenase/reductase SDR  31.13 
 
 
264 aa  111  2.0000000000000002e-23  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  30.43 
 
 
258 aa  110  3e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  32.97 
 
 
248 aa  110  3e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_010501  PputW619_3131  short-chain dehydrogenase/reductase SDR  31.91 
 
 
245 aa  109  6e-23  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  37.3 
 
 
238 aa  109  7.000000000000001e-23  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2737  short-chain dehydrogenase/reductase SDR  32.45 
 
 
245 aa  109  8.000000000000001e-23  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1552  short-chain dehydrogenase/reductase SDR  33.91 
 
 
246 aa  108  9.000000000000001e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0291  short chain dehydrogenase  27.05 
 
 
334 aa  108  9.000000000000001e-23  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1575  short-chain dehydrogenase/reductase SDR  33.91 
 
 
246 aa  108  9.000000000000001e-23  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1418  short-chain dehydrogenase/reductase SDR  32.2 
 
 
334 aa  108  1e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00000382267 
 
 
-
 
NC_010511  M446_1056  short-chain dehydrogenase/reductase SDR  27.12 
 
 
332 aa  108  1e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.843879 
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  31.25 
 
 
286 aa  108  1e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_009512  Pput_3738  short-chain dehydrogenase/reductase SDR  31.91 
 
 
245 aa  108  1e-22  Pseudomonas putida F1  Bacteria  normal  0.880926  normal 
 
 
-
 
NC_007614  Nmul_A1489  short chain dehydrogenase  30.2 
 
 
296 aa  107  2e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3865  short-chain dehydrogenase/reductase SDR  34.55 
 
 
247 aa  107  3e-22  Serratia proteamaculans 568  Bacteria  normal  0.269971  normal 
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  36.63 
 
 
257 aa  107  3e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
NC_013037  Dfer_5584  short-chain dehydrogenase/reductase SDR  30.97 
 
 
344 aa  107  3e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.753226  normal  0.910238 
 
 
-
 
NC_008527  LACR_1627  oxidoreductase  32.04 
 
 
255 aa  106  4e-22  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1086  Short-chain alcohol dehydrogenase of unknown specificity  35.91 
 
 
247 aa  107  4e-22  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.144372  n/a   
 
 
-
 
NC_012850  Rleg_2480  short-chain dehydrogenase/reductase SDR  29.96 
 
 
245 aa  106  5e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_46600  short chain dehydrogenase  32.19 
 
 
268 aa  106  5e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000000918039  hitchhiker  0.00000172259 
 
 
-
 
NC_010557  BamMC406_6285  short chain dehydrogenase  29.49 
 
 
327 aa  105  8e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.306501  hitchhiker  0.00902289 
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  31.2 
 
 
336 aa  105  8e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_010511  M446_4281  short-chain dehydrogenase/reductase SDR  29.49 
 
 
333 aa  105  9e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  31.2 
 
 
336 aa  105  1e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5141  short-chain dehydrogenase/reductase SDR  30.74 
 
 
337 aa  105  1e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.460239  normal 
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  34.78 
 
 
238 aa  105  1e-21  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_009051  Memar_1129  short-chain dehydrogenase/reductase SDR  33.7 
 
 
278 aa  104  2e-21  Methanoculleus marisnigri JR1  Archaea  normal  0.561593  n/a   
 
 
-
 
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