| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2604 |
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| Symbol | |
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| ID | 6111555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2887786 |
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| End bp | 2889111 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622393 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001749467 |
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| Protein GI | 170721779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.155527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC AAGCGACAGG CATGAAACCA GGCGAACGCT ACTGCGTGGA GAACGTCGAG
CGCGCTCATC AGTTCCCTGG CTTCTTTCAA GACGGCAAGT ATTACCTTGG CCCCGAGCTG
CTCACGGCAG TCGGATGGCT TGAAGGGACG AAGTTCATCT ATGACAGTCT GGATGCGCAA
GGTGAACCGG CCTTCCCGGA GCGGGTGGCG GGCACCATTG AGGGCATGAA GCTGGTGCTG
GTCGACGGCA CTGCACTGCA GCTCTCGAAG ATAGCACCCA GTGATACCCT CCTACCTACG
GCTGGCAACA TCGAGCAAGC CTCACAGCCT GACGAACCTG AAGCTCCAGC ACCGGTAAAG
GGCCCGTTGC GCGGCAAAGT CGTGGTCATC ACTGGCGCAT CGAGTGGTAT AGGCAGGGCT
GCCGCGCATG CCTTCGCTTG CAAAGGCGCA CGGCTGGTGC TCGCCGCACG CGATGAGCAA
GCGTTGTTCG ATGTGCTGGA CGAATGCACC GACTGTGGAA CAGACGCGGT GGCAATCATC
ACCGACGTCA CCCGTAGCGA TCAGGTGCAA GCGCTGGCCA CGCAGGCGGC CGAATTTGGC
CATGGCCGGA TCGATATCTG GGTCAACAAC GCAGGCGTTG GCGCGGTGGG CAACTTCGAG
CAAACGCCCC TGGAAGCACA TGAACAGGTC ATTCAGACCG ACCTGATCGG TTACCTGCGC
GGGGCCCACG TGGCCCTTCC CTATTTCAAG GCCCAACGCA GCGGCATCCT CATCAACACA
CTGTCCCTGG GAAGCTGGGT TGCCCAGCCC TACGCGGCGG CCTATTCGGC AAGCAAATTC
GGCCTGCGCG GCCTGACCGA AGCGCTGCGC GGAGAATTGA CGGAGTTCCC CGACATCCAC
GTCTGCGACA TTTATCCAGC GGTCATGGAC ACCCCAGGCT TCAGGGATGG CGGCAATTAC
ACCGGCCATG CGCTCACGCC ACCCGGGCCG ATCTACGACC CGGAGCGGGT AGCCAAGGCC
ATGGTAGCTA CCGCTATATC CCCACGCGCC AACACCACGG TGGGCGCTGC CGCTCGCCTT
GCCCACCTGG CGAGCTACGT CGTTCCGCGG CTGGCGCTGG TTTCAGGGTG GCTAACTCGC
AGGGCCTTGA GCCGCAGCCC CAATGCAGAG GTTTCTTCCG GCAACCTGTT CGAGCCACCG
AGTGGCCGGC GCAGCGTGGA CGGTGGCTGG AAATCCAGCA ACGACATGCC GTTGTGGGTC
GTGGCGGCAG CCCTCGGGGT CATCGCAGGG CTGGCCGTCA CCCGCTCGCA ACGCAGGCGC
CGTTAA
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| Protein sequence | MIDQATGMKP GERYCVENVE RAHQFPGFFQ DGKYYLGPEL LTAVGWLEGT KFIYDSLDAQ
GEPAFPERVA GTIEGMKLVL VDGTALQLSK IAPSDTLLPT AGNIEQASQP DEPEAPAPVK
GPLRGKVVVI TGASSGIGRA AAHAFACKGA RLVLAARDEQ ALFDVLDECT DCGTDAVAII
TDVTRSDQVQ ALATQAAEFG HGRIDIWVNN AGVGAVGNFE QTPLEAHEQV IQTDLIGYLR
GAHVALPYFK AQRSGILINT LSLGSWVAQP YAAAYSASKF GLRGLTEALR GELTEFPDIH
VCDIYPAVMD TPGFRDGGNY TGHALTPPGP IYDPERVAKA MVATAISPRA NTTVGAAARL
AHLASYVVPR LALVSGWLTR RALSRSPNAE VSSGNLFEPP SGRRSVDGGW KSSNDMPLWV
VAAALGVIAG LAVTRSQRRR R
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