| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_20190 |
|---|
| Symbol | |
|---|
| ID | 7760947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2009105 |
|---|
| End bp | 2010115 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643804916 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002799199 |
|---|
| Protein GI | 226944126 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA TCTCTACCGG AACGGTCGTC GTCATCGCCG GAGCCTCGAG CGGCATCGGC
CGCGCCACCG CCCACGCCTT CGCCGAGCGC GGCGCCAGGC TCCTGCTCGC CGCACGGCGC
ACGGCGCACG GCGCACGGCG CACGGAGATG CTCGCGGAGG TGGCGCGCCA GAGCCGGGAT
CTGGGCGGCA GCGCCTTCGC CCTGGGCACC GACGTGAGCC GCGAGGAGGA CGTCGAAAAG
CTGGCGCGTC AGGCCATCGT CCGCTTCGGC CGCGTCGACC TGTGGTTCAA CAACGCCGGG
GTCGGCGTAT TCGGCCGGCT GGAGGATATT CCTTCCGAGG TCTGGCGCCG AGTGATCGAA
ACCGATGTCT TCGGCTACAT GTACGGCGCC AAGGCGGCGA TACGCCAGTT TCGCACCCGG
GGCCACGGCA TCCCGATCAA CGACGTCTCC ATCGTCGGGG TCCTCGCCAA ACCGGACTCC
ACCGCCTACG CCACCGGCAA GTTCGCCGTG CGAGGCTTCT CCGAGGCCCT GCGCCAGGAA
CTGCTGGACC AGCCGGGCAT CCATGTCTGC ACTGTCCTGC CCGCGCTCAT CGACACGCCC
TGCTTCGAGC ATGCGGCCAA CTGCAGCCAG CACCGGGTAC GCGCCGCACC GCCGGTCCAC
ACGCCGGAGA AGGTTGCCCG CGCGGTCGTG GACCTGGTGC GGTTTCCGCG TGCCGGAATC
GTCGTCGGCG GGGCCGGACG CGCAGCCATC CTGCTGAAAC GCCCGGCCCC CGGGCTGATG
ACGCGGCTCG ACGCCCGGAT GCTCCATCGC GGTTTTCTCA CCGGTGAGCC GGGCGCACAG
ACCAGCGGCA CCCTGTGCGA GCCGATGTAC GACGGACACG GCGTCCGCGG CGGCTGGCAC
AAGGGCGCGA ACAACGGCGG CGTGCCGTCG TTGCCGGTCC TGGCCCCGAT CGGTCTTCCG
CTCGGCATCC TGCTCTGGCG ACGCCCGAGC CGGACATGGC GCCCGAGATG A
|
|---|
| Protein sequence | MDPISTGTVV VIAGASSGIG RATAHAFAER GARLLLAARR TAHGARRTEM LAEVARQSRD
LGGSAFALGT DVSREEDVEK LARQAIVRFG RVDLWFNNAG VGVFGRLEDI PSEVWRRVIE
TDVFGYMYGA KAAIRQFRTR GHGIPINDVS IVGVLAKPDS TAYATGKFAV RGFSEALRQE
LLDQPGIHVC TVLPALIDTP CFEHAANCSQ HRVRAAPPVH TPEKVARAVV DLVRFPRAGI
VVGGAGRAAI LLKRPAPGLM TRLDARMLHR GFLTGEPGAQ TSGTLCEPMY DGHGVRGGWH
KGANNGGVPS LPVLAPIGLP LGILLWRRPS RTWRPR
|
|---|
| |