| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0808 |
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| Symbol | |
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| ID | 7971860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 891528 |
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| End bp | 892286 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791406 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002942727 |
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| Protein GI | 239813817 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCG TTCAAGACAA CATCCAAGGC AAGGTCGCCA TCGTCACCGG CGCGAGCAGC
GGGATCGGCG AATCGACCGC GCGCCACCTG GCCGCGCGCG GCGCCAAGGT GGTGCTCGCG
GCGCGCCGCA CCGACCGGCT CGACAAGGTG GTCGCCGAGA TCCGCGAGGC CGGCGGCGAG
GCCATCGCCG TGGCCACCGA CGTGGCGAAG CGCGCCGATC TCGACAAGCT CGCGGCCGCC
ACCGTCGAGG CCTTCGGCCG CATCGACGTG CTGGTCAACA ACGCGGGCGT GATGCCGCTG
TCGCCACTCG AAAAGCTCAA GGTCGACGAG TGGGACCGCA CCATCGACGT CAACATCAAG
GGCGTGCTCT ACGGCATTGC CGCGGTGCTG CCGCGCATGC AGGCGCAGGG CCGCGGCCAC
ATCGTCAACG TCGCGTCGAT CGCGGGGCTC AAGGTGTTCA CGCCGATCGG CACGGTCTAC
AGCGCAACCA AGCATGCGGT GCGCGCGATC TCCGAAGGGC TGCGCGTCGA AATGGGCAAC
AGCGGCGTGC GCGTGACCAT CGTCTCGCCC GGCGCGGTGG AGTCGGAGCT GAAGTTCGGC
AGCACCGACG CCGAGAGCGC GGCCGGCGTG AAGGCGTTCT ACGAGGCCAA CCAGATTCCC
GCCGATTCGG TGGCGCGCGC GGTGGTCTAT GCCGTGGAGC AGCCGGCGGA CGTGGACATC
AACGAGGTGG TGCTGCGGCC GGTCTCGCAG GAGTTCTGA
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| Protein sequence | MTSVQDNIQG KVAIVTGASS GIGESTARHL AARGAKVVLA ARRTDRLDKV VAEIREAGGE
AIAVATDVAK RADLDKLAAA TVEAFGRIDV LVNNAGVMPL SPLEKLKVDE WDRTIDVNIK
GVLYGIAAVL PRMQAQGRGH IVNVASIAGL KVFTPIGTVY SATKHAVRAI SEGLRVEMGN
SGVRVTIVSP GAVESELKFG STDAESAAGV KAFYEANQIP ADSVARAVVY AVEQPADVDI
NEVVLRPVSQ EF
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