| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2986 |
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| Symbol | |
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| ID | 5870771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3336738 |
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| End bp | 3338063 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641548102 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001669214 |
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| Protein GI | 167033983 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.889744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.40482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATC AAGCGACAGG CATGAAATCA GCTGAACGCT ATCGCGTGGA AAACGTGGAG
CGTGCACATC AGTTTCCAGG CTTCTTTCAA GACGGGAAGT ATTACCTCGG CCCGGAACTT
TTAACCGCCG TGGGTTGGCT TGAGGGCACA CGATTCATCT ACGACAGCCT GGATGCCGAA
GGTGAGCCCG TGTTTCCTAA CCGGGAGGCG GGAATCATCG AAGGGCTGAC TTTAACCCTG
GTCGATGGCA CCGCTCTGGG ACTTTCCCGA ATCGAGGCCA GCGAAGCCCT TGCTGACTTT
GACACCAGTA CGTCGGGCAC AAAAGAAGGA GCACTTGGCG ATAGTTACCC TATCAAGGGG
CCGCTTCGCG GCAAAGTCGT AGTGATCACT GGTGCTTCCA GCGGGATAGG CCGCGCCGCT
GCGCACGCCT TTGCGTGCAA AGGTGCTCGC CTGGTACTCG CAGCACGCGA CGAAGAGGCG
TTATTCGACG TCCTGGATGA ATGCACCGAT TGCGGTACGG ACGCCATAGC GATTATGACG
GACGTCACCC GCAACGATCA GGTTCAAGCG CTGGCCGAGC AGGCTGCAGA ATTTGGCCAT
GGACGGATTG ATATCTGGGT CAACAACGCC GGCGTGGGCG CGGTCGGCAA TTTCGAGGAA
ACGCCCCTGG AGGCACACGA GCAGGTCATC CAAACCGACC TGATTGGCTA CCTGCGTGGC
GCCTATGTGG CCCTTCCCTT CTTCAAGACT CAAGGTAGCG GCATCCTAAT CAACACGCTG
TCACTGGGCA GTTGGGTTGC CCAGCCCTAT GCAGCGGCCT ATTCGGCGAG CAAGTTCGGA
CTGAGAGGCC TCACCGAGGC ACTGCGAGGA GAGCTGACTG AGTTTCCCGA CATCCACGTC
TGCGATATTT ATCCTGCGGT GATGGATACG CCCGGTTTCA GGGACGGGGG GAACTATACA
GGCCATGCGC TCACCCCCCT TGGGCCAATC TACGATCCGG AGTTGGTGGC CAAAGCCATG
GTGGCTTGCG CCATTTCCCC TCGAGCGCAT ACCACCGTCG GCGCAACCGC TCGCCTTGCC
CACCTGGCCA GTTTCCTCGT CCCAGGGTTG CCGCAACTTT CCGGATGGCT CACGCGCTGG
GGTTTGAGCC GAAGTCCTCG TGCGGAGATT TCTTCAGGAA ATCTGTTCGA ACCACCGAAT
GGGAGACGCA GTGTTGACGG TGGCTGGCGA TCTCAGAGAA GCAAGACACC GTTGTTAGTG
ACTGCGGCAG TGCTCGGGAT CATTGCGGGA TTCGTCATCA CTCGCTCCCA ACGCAGGCAC
CCCTAG
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| Protein sequence | MIDQATGMKS AERYRVENVE RAHQFPGFFQ DGKYYLGPEL LTAVGWLEGT RFIYDSLDAE
GEPVFPNREA GIIEGLTLTL VDGTALGLSR IEASEALADF DTSTSGTKEG ALGDSYPIKG
PLRGKVVVIT GASSGIGRAA AHAFACKGAR LVLAARDEEA LFDVLDECTD CGTDAIAIMT
DVTRNDQVQA LAEQAAEFGH GRIDIWVNNA GVGAVGNFEE TPLEAHEQVI QTDLIGYLRG
AYVALPFFKT QGSGILINTL SLGSWVAQPY AAAYSASKFG LRGLTEALRG ELTEFPDIHV
CDIYPAVMDT PGFRDGGNYT GHALTPLGPI YDPELVAKAM VACAISPRAH TTVGATARLA
HLASFLVPGL PQLSGWLTRW GLSRSPRAEI SSGNLFEPPN GRRSVDGGWR SQRSKTPLLV
TAAVLGIIAG FVITRSQRRH P
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