| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_0996 |
|---|
| Symbol | |
|---|
| ID | 4678162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 1004041 |
|---|
| End bp | 1005072 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639843515 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_990595 |
|---|
| Protein GI | 121596572 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.663659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCA CGCTGAAGCC GATCGGCGAG CAGACGATCG TGATCACCGG CGCGACGAGC
GGCATCGGGC TCGTCACCGC GCGCAAGGCC GCGAAGAAGG GCGCGAAGCT CGTGCTCGTC
GCGCGCAACG ATACCGCGCT CGAGGCGCTA TGCGAGGAGA TCCGCCAGCA CGTCGGCCTC
GCCGTCGCGG TCGCGGCCGA CGTGAGCCGC TACGAGGACG TCCAGCGCGC GGCGGCGAAG
GCCGTCGAGA CGTTCGGCGG CTTCGACACG TGGATCAACA ACGCGGGCGT GACGATCTTC
GGCTCCGCGC TGTCGGTGCC GCTCGACGAC CAGCGCCGGC TGTTCGATAC GAACTACTGG
GGCGTCGTGC ATGGCTCGCT CGTCGCGTCC GAGCATTTTC GCCGCAAGAG CGACTTTCGC
GGCGGCGCGA TCATCAACAT GGGCAGCGAG GCGTCCGACG CGCCGGTGCC GCTGCAAAGC
GCGTATGCGG CATCCAAGCA CGCGATCAAG GGCTTCACCG ATTCGCTGCG CATCGAGCTC
GAGGCGGACA ACGTGCCGGT GTCGGTCACG CTCGTCAAGC CCGCGGCCGT CGACACGATG
TTCGTGATGC ACGCGAAGAA CTACATGAAC GTCGAGGCGA AGCTGCCGCC GCCGATCTAC
GATCCGGACA TCGTCGCCGA CGCGATCCTG TTCGCGGCCG AGCATGCCCG TCGCACGCTG
TTTGTCGGCG GCGCGGCGAA GCTCGCGTCG TCGGGCGCGT ATCACGCGCC GCGGCTGTTC
GACCGGCTCG CCACGTCGCT GTTCTCGCGC GGGCAGCGCA CGATGCGCCC CGCGCGGCCG
CGCGACGACA ACGCGCTGTA CGAGCCGACG CGCCCGTTGC ACGAGCGCGA AGGGATGGAC
GGCGTGGTGC TGCGCTCGTG CGCGTACAAC ACGGTGATGC AGCGGCCGAG AGTCGCCGGC
GCGCTCGCGC TGACGGCCGC GGCGCTCGTC GTCGCGGCGC TCGCGCGCGC TCGGCGCGAC
GTCGCTTCGT AG
|
|---|
| Protein sequence | MKCTLKPIGE QTIVITGATS GIGLVTARKA AKKGAKLVLV ARNDTALEAL CEEIRQHVGL
AVAVAADVSR YEDVQRAAAK AVETFGGFDT WINNAGVTIF GSALSVPLDD QRRLFDTNYW
GVVHGSLVAS EHFRRKSDFR GGAIINMGSE ASDAPVPLQS AYAASKHAIK GFTDSLRIEL
EADNVPVSVT LVKPAAVDTM FVMHAKNYMN VEAKLPPPIY DPDIVADAIL FAAEHARRTL
FVGGAAKLAS SGAYHAPRLF DRLATSLFSR GQRTMRPARP RDDNALYEPT RPLHEREGMD
GVVLRSCAYN TVMQRPRVAG ALALTAAALV VAALARARRD VAS
|
|---|
| |