Gene BURPS1106A_A3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A3026 
Symbol 
ID4903427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp2940329 
End bp2941360 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content70% 
IMG OID640146129 
Productshort chain dehydrogenase 
Protein accessionYP_001077055 
Protein GI126457694 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.327343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGCA CGCTGAAGCC GATCGGCGAG CAGACGATCG TGATCACCGG CGCGACGAGC 
GGCATCGGGC TCGTCACCGC GCGCAAGGCC GCGAAGAAGG GCGCGAAGCT CGTGCTCGTC
GCGCGCAACG ATACCGCGCT CGAGGCGCTA TGCGAGGAGA TCCGCCAGCA CGGCGGCCTC
GCCGTCGCGG TCGCGGCCGA CGTGAGCCGC TACGAGGACG TCCAGCGCGC GGCGGCGAAG
GCCGTCGAGA CGTTCGGCGG CTTCGACACG TGGATCAACA ACGCGGGCGT GACGATCTTC
GGCTCCGCGC TGTCGGTGCC GCTCGACGAC CAGCGCCGGC TGTTCGATAC GAACTACTGG
GGCGTCGTGC ATGGCTCGCT CGTCGCGTCC GAGCATTTTC GCCGCAAGAG CGACTTTCGC
GGCGGCGCGA TCATCAACAT GGGCAGCGAG GCGTCCGACG CGCCGGTGCC GCTGCAAAGC
GCGTATGCGG CATCCAAGCA CGCGATCAAG GGCTTCACCG ATTCGCTGCG CATCGAGCTC
GAGGCGGACA ACGTGCCGGT GTCGGTCACG CTCGTCAAGC CCGCGGCCGT CGACACGATG
TTCGTGATGC ACGCGAAGAA CTACATGAAC GTCGAGGCGA AGCTGCCGCC GCCGATCTAC
GATCCGGACA TCGTCGCCGA CGCGATCCTG TTCGCGGCCG AGCATGCCCG TCGCACGCTG
TTCGTCGGCG GCGCGGCGAA GCTCGCGTCG TCGGGCGCGT ATCACGCGCC GCGGCTGTTC
GACCGGCTCG CCACGTCGCT GTTCTCGCGC GGGCAGCGCA CGATGCGCCC CGCGCGGCCG
CGCGACGACA ACGCGCTGTA CGAGCCGACG CGCCCGTTGC ACGAGCGCGA AGGGATGGAC
GGCGTGGTGC TGCGCTCGTG CGCGTACAAC ACGGTGATGC AGCGGCCGAG AGTCGCCGGC
GCGCTCGCGC TGACGGCCGC GGCGCTCGTC GTCGCGGCGC TCGCGCGCGC TCGGCGCGGC
GTCGCTTCGT AG
 
Protein sequence
MKCTLKPIGE QTIVITGATS GIGLVTARKA AKKGAKLVLV ARNDTALEAL CEEIRQHGGL 
AVAVAADVSR YEDVQRAAAK AVETFGGFDT WINNAGVTIF GSALSVPLDD QRRLFDTNYW
GVVHGSLVAS EHFRRKSDFR GGAIINMGSE ASDAPVPLQS AYAASKHAIK GFTDSLRIEL
EADNVPVSVT LVKPAAVDTM FVMHAKNYMN VEAKLPPPIY DPDIVADAIL FAAEHARRTL
FVGGAAKLAS SGAYHAPRLF DRLATSLFSR GQRTMRPARP RDDNALYEPT RPLHEREGMD
GVVLRSCAYN TVMQRPRVAG ALALTAAALV VAALARARRG VAS