Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A3026 |
Symbol | |
ID | 4903427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2940329 |
End bp | 2941360 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640146129 |
Product | short chain dehydrogenase |
Protein accession | YP_001077055 |
Protein GI | 126457694 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.327343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGCA CGCTGAAGCC GATCGGCGAG CAGACGATCG TGATCACCGG CGCGACGAGC GGCATCGGGC TCGTCACCGC GCGCAAGGCC GCGAAGAAGG GCGCGAAGCT CGTGCTCGTC GCGCGCAACG ATACCGCGCT CGAGGCGCTA TGCGAGGAGA TCCGCCAGCA CGGCGGCCTC GCCGTCGCGG TCGCGGCCGA CGTGAGCCGC TACGAGGACG TCCAGCGCGC GGCGGCGAAG GCCGTCGAGA CGTTCGGCGG CTTCGACACG TGGATCAACA ACGCGGGCGT GACGATCTTC GGCTCCGCGC TGTCGGTGCC GCTCGACGAC CAGCGCCGGC TGTTCGATAC GAACTACTGG GGCGTCGTGC ATGGCTCGCT CGTCGCGTCC GAGCATTTTC GCCGCAAGAG CGACTTTCGC GGCGGCGCGA TCATCAACAT GGGCAGCGAG GCGTCCGACG CGCCGGTGCC GCTGCAAAGC GCGTATGCGG CATCCAAGCA CGCGATCAAG GGCTTCACCG ATTCGCTGCG CATCGAGCTC GAGGCGGACA ACGTGCCGGT GTCGGTCACG CTCGTCAAGC CCGCGGCCGT CGACACGATG TTCGTGATGC ACGCGAAGAA CTACATGAAC GTCGAGGCGA AGCTGCCGCC GCCGATCTAC GATCCGGACA TCGTCGCCGA CGCGATCCTG TTCGCGGCCG AGCATGCCCG TCGCACGCTG TTCGTCGGCG GCGCGGCGAA GCTCGCGTCG TCGGGCGCGT ATCACGCGCC GCGGCTGTTC GACCGGCTCG CCACGTCGCT GTTCTCGCGC GGGCAGCGCA CGATGCGCCC CGCGCGGCCG CGCGACGACA ACGCGCTGTA CGAGCCGACG CGCCCGTTGC ACGAGCGCGA AGGGATGGAC GGCGTGGTGC TGCGCTCGTG CGCGTACAAC ACGGTGATGC AGCGGCCGAG AGTCGCCGGC GCGCTCGCGC TGACGGCCGC GGCGCTCGTC GTCGCGGCGC TCGCGCGCGC TCGGCGCGGC GTCGCTTCGT AG
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Protein sequence | MKCTLKPIGE QTIVITGATS GIGLVTARKA AKKGAKLVLV ARNDTALEAL CEEIRQHGGL AVAVAADVSR YEDVQRAAAK AVETFGGFDT WINNAGVTIF GSALSVPLDD QRRLFDTNYW GVVHGSLVAS EHFRRKSDFR GGAIINMGSE ASDAPVPLQS AYAASKHAIK GFTDSLRIEL EADNVPVSVT LVKPAAVDTM FVMHAKNYMN VEAKLPPPIY DPDIVADAIL FAAEHARRTL FVGGAAKLAS SGAYHAPRLF DRLATSLFSR GQRTMRPARP RDDNALYEPT RPLHEREGMD GVVLRSCAYN TVMQRPRVAG ALALTAAALV VAALARARRG VAS
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