| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0149 |
|---|
| Symbol | |
|---|
| ID | 8356248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 181158 |
|---|
| End bp | 182138 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962292 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003119852 |
|---|
| Protein GI | 256419199 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATC AGATTGCAAA TAAAGTCGTG GTAATTACCG GTGCTTCCAG TGGTGCTGGT
CGCGCAACAG CTTTTGAGCT GGCAGAAGAA AAAGCATTTC TTGTACTGGC ATCAAGGAAT
GAACAGGTAT TGGAAGAACT GGCGGAAGAA TGCCGGAAGA TAGGATGTGA GGTATTGGTG
GCGCCAACAG ATGTGACTGA TAATACGGCG ATGCATCGTC TGGCTGTGAA GGCATTTGAA
TGGAAGGGTC GAATTGACGT GTGGGTCAAT AATGCCGGTG TGCTTGCCGC CGGCACTTTT
GAAGAGATGC CCTGGGAGGC TCATCAGAAA GTGATCAACA CAAATCTGCT GGGTTATATG
AGTGGTGCAC ATGCAGTCTT ACCGTATTTC AAACGTCAGG GAGAAGGAAT ACTAATCAAT
AATATTTCTA TAGGCGCTTA TGTGTCTGTA CCATATGGTG GGGCCTATAC TGCCAGCAAA
TTTGCACTGA GGGGGTTCTT TGAATCACTG AAGGGAGAGT TGACTGGTTG GTCCGGTATC
CATATTGTAG ATTTGTTCCC CGCGTTTCTT GATACGCCCG GAATACAACA TGCCGGCAAT
TACACGGGAA AGGTGCTAAA ACCTTCCCCT CCTGTTTATG ATCCACGCAT TGTGGCACAT
AGCGTAAAAT CGTCTATTCT ATATCCTAAA TCAACCCGTT ATCCGGGTGG GGCTTCGTTA
TTATTTAAGA TCGGGCATTC ATTAGCTCCG GAATGGATGT CGAAGATGAC AGGATTGCTG
ATGAAAGGTT ATTTTAAAGT AGCGGACCCC GCTGAGAAAA CTGATGGAAA TCTTTTTCAG
TCAGTAGATT TTTCAATGAG TACGAATGGT AATTCCCGTC CAAGGTTAAC TCCCCACGGA
AGAAGAATGT TGGGACTGGG ACTTGCAGGA GCCGCCATAG GATTGGGACT ATATATGCTA
AGTGGAAAAC GTAATGCATA A
|
|---|
| Protein sequence | MRNQIANKVV VITGASSGAG RATAFELAEE KAFLVLASRN EQVLEELAEE CRKIGCEVLV
APTDVTDNTA MHRLAVKAFE WKGRIDVWVN NAGVLAAGTF EEMPWEAHQK VINTNLLGYM
SGAHAVLPYF KRQGEGILIN NISIGAYVSV PYGGAYTASK FALRGFFESL KGELTGWSGI
HIVDLFPAFL DTPGIQHAGN YTGKVLKPSP PVYDPRIVAH SVKSSILYPK STRYPGGASL
LFKIGHSLAP EWMSKMTGLL MKGYFKVADP AEKTDGNLFQ SVDFSMSTNG NSRPRLTPHG
RRMLGLGLAG AAIGLGLYML SGKRNA
|
|---|
| |